RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 USP38Q8NB14 1042 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 APBB2Q92870 758 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 ZNF668Q96K58 619 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-204ENST00000370496 NLRP4Q96MN2 994 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 COL4A3BPQ9Y5P4 624 aa16.51■□□□□ 0.23
COL9A1-204ENST00000370496 E9PMD0 336 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 GPR32O75388 356 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 EYA4O95677 639 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 SSBP05455 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL9A1-204ENST00000370496 KCNJ6P48051 423 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 ME1P48163 572 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
COL9A1-204ENST00000370496 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
COL9A1-204ENST00000370496 GPNMBQ14956 572 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 KARSQ15046 597 aaKnown RBP16.5■□□□□ 0.23
COL9A1-204ENST00000370496 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 HYIQ5T013 277 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 PADI6Q6TGC4 694 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 DBF4BQ8NFT6 615 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 OSBPL7Q9BZF2 842 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 POLR3FQ9H1D9 316 aaPredicted RBP16.5■□□□□ 0.23
COL9A1-204ENST00000370496 XPNPEP1Q9NQW7 623 aa16.5■□□□□ 0.23
COL9A1-204ENST00000370496 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 PLCG1P19174 1290 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 CD52P31358 61 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 DDIT3P35638 169 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 GRB10Q13322 594 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 IKBKEQ14164 716 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 KCNK18Q7Z418 384 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 CCDC39Q9UFE4 941 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 SQORQ9Y6N5 450 aa16.49■□□□□ 0.23
COL9A1-204ENST00000370496 TCHHQ07283 1943 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 PTPRSQ13332 1948 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 RBAK-RBAKDNI3L0D1 243 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 EFCAB14O75071 495 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
COL9A1-204ENST00000370496 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 SPATA32Q96LK8 384 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
COL9A1-204ENST00000370496 CCSER1Q9C0I3 900 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 CDHR5Q9HBB8 845 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 CXXC1Q9P0U4 656 aaPredicted RBP16.48■□□□□ 0.23
COL9A1-204ENST00000370496 SLC4A7Q9Y6M7 1214 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 GBF1Q92538 1859 aa16.48■□□□□ 0.23
COL9A1-204ENST00000370496 A0A087WZ62 844 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 ABHD14A-ACY1A0A1B0GW23 586 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 CUTAO60888 179 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 WDR5P61964 334 aaKnown RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 LAMTOR4Q0VGL1 99 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 TFDP1Q14186 410 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 MXD4Q14582 209 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 HABP4Q5JVS0 413 aaKnown RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 CHAMP1Q96JM3 812 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 FDXACB1Q9BRP7 624 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 ADAMTS10Q9H324 1103 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 AGO3Q9H9G7 860 aaKnown RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
COL9A1-204ENST00000370496 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
COL9A1-204ENST00000370496 PLA2G4BP0C869 781 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 SRGAP2CP0DJJ0 459 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 DARSP14868 501 aaKnown RBP16.46■□□□□ 0.23
COL9A1-204ENST00000370496 CYP11B2P19099 503 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 SFPQP23246 707 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL9A1-204ENST00000370496 EIF4BP23588 611 aaKnown RBP16.46■□□□□ 0.23
COL9A1-204ENST00000370496 PHKA2P46019 1235 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 RASIP1Q5U651 963 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 USP49Q70CQ1 688 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 FAM228AQ86W67 206 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 ASAP3Q8TDY4 903 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
COL9A1-204ENST00000370496 SLC9A7Q96T83 725 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
COL9A1-204ENST00000370496 MYH11P35749 1972 aa16.46■□□□□ 0.22
COL9A1-204ENST00000370496 LAMA3Q16787 3333 aa16.46■□□□□ 0.22
COL9A1-204ENST00000370496 LRRIQ4A6NIV6 560 aa16.45■□□□□ 0.22
COL9A1-204ENST00000370496 GPR182O15218 404 aa16.45■□□□□ 0.22
COL9A1-204ENST00000370496 ASAP2O43150 1006 aa16.45■□□□□ 0.22
COL9A1-204ENST00000370496 AMHP03971 560 aa16.45■□□□□ 0.22
COL9A1-204ENST00000370496 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
COL9A1-204ENST00000370496 STAT6P42226 847 aa16.45■□□□□ 0.22
COL9A1-204ENST00000370496 CAPSQ13938 189 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms