RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CDK17Q00537 523 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ITIH3Q06033 890 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 DNAJC3Q13217 504 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ANKRD20A2Q5SQ80 823 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ANKRD20A1Q5TYW2 823 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 AGBL2Q5U5Z8 902 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ANKRD20A3Q5VUR7 823 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 KAZNQ674X7 775 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SPATA21Q7Z572 469 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM84BQ96KN1 310 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SH2D3AQ9BRG2 576 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 BLOC1S4Q9NUP1 217 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SLC12A6Q9UHW9 1150 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 DRAP1Q14919 205 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 FIGNQ5HY92 759 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 HHATQ5VTY9 493 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 TMEM154Q6P9G4 183 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 STMN2Q93045 179 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SH3GL3Q99963 347 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 BRIP1Q9BX63 1249 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 BHMT2Q9H2M3 363 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 TTC7AQ9ULT0 858 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 COL18A1P39060 1754 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 LAD1O00515 517 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 COPS2P61201 443 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 SLC30A9Q6PML9 568 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ZNF365Q70YC5 407 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 GH1P01241 217 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 KRT5P13647 590 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ISLR2Q6UXK2 745 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 PPM1KQ8N3J5 372 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 THAP2Q9H0W7 228 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 PABPC3Q9H361 631 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■■ 29.3
PRPF38B-201ENST00000370021 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 TXNDC9O14530 226 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 FGFR2P21802 821 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 UBAP2Q5T6F2 1119 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 C6orf89Q6UWU4 347 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 C4orf33Q8N1A6 199 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 UBE2TQ9NPD8 197 aaPredicted RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 A0A0G2JND7 137 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 RASA4BC9J798 803 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 RASA4O43374 803 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 GNA14O95837 355 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 MYBP10242 640 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 KCNA1Q09470 495 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 XRCC4Q13426 336 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 LRRC36Q1X8D7 754 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 MAGEF1Q9HAY2 307 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 FRMD4BQ9Y2L6 1034 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 LAMB4A4D0S4 1761 aa11.22□□□□□ -0.61
PRPF38B-201ENST00000370021 GOLGA8RI6L899 631 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 PJA2O43164 708 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 FTLP02792 175 aaPredicted RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 RCAN1P53805 252 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 RPS8P62241 208 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 SGO2Q562F6 1265 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM186BQ8IYM0 893 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 PPFIBP2Q8ND30 876 aa11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 NAF1Q96HR8 494 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-201ENST00000370021 DYDC2Q96IM9 177 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms