RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 UTP14CQ5TAP6 766 aaKnown RBP11.17□□□□□ -0.62
TPM3-210ENST00000368530 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
TPM3-210ENST00000368530 CLP1Q92989 425 aaKnown RBP11.17□□□□□ -0.62
TPM3-210ENST00000368530 ZNF689Q96CS4 500 aaPredicted RBP11.17□□□□□ -0.62
TPM3-210ENST00000368530 CSRNP2Q9H175 543 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
TPM3-210ENST00000368530 FAM13BQ9NYF5 915 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 HPSEQ9Y251 543 aa11.17□□□□□ -0.62
TPM3-210ENST00000368530 MBLAC1A4D2B0 266 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 GRM6O15303 877 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 BMP15O95972 392 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 RB1P06400 928 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 GHRP10912 638 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 ITGB5P18084 799 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 TCF7P36402 384 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 DLX2Q07687 328 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 HYAL1Q12794 435 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.621e-7■■■■□ 26.2
TPM3-210ENST00000368530 UBE2SQ16763 222 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 KRT25Q7Z3Z0 450 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 RTN4RL1Q86UN2 441 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 REXO1Q8N1G1 1221 aaKnown RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
TPM3-210ENST00000368530 KCNH3Q9ULD8 1083 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 MUC6Q6W4X9 2439 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 PIEZO1Q92508 2521 aa11.16□□□□□ -0.62
TPM3-210ENST00000368530 MYO7AQ13402 2215 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 ESYT2A0FGR8 921 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 ALADP13716 330 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 SSTR3P32745 418 aaPredicted RBP11.15□□□□□ -0.62
TPM3-210ENST00000368530 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
TPM3-210ENST00000368530 SP4Q02446 784 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 LETM2Q2VYF4 491 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 FBXO47Q5MNV8 452 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 FIBCD1Q8N539 461 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 PDILTQ8N807 584 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 LINC01599Q8WXQ3 324 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 GPRASP2Q96D09 838 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 PCYT2Q99447 389 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 DNAJC25Q9H1X3 360 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 AGO3Q9H9G7 860 aaKnown RBP11.15□□□□□ -0.62
TPM3-210ENST00000368530 PRKAG3Q9UGI9 489 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 UBIAD1Q9Y5Z9 338 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
TPM3-210ENST00000368530 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 POLR2DO15514 142 aaKnown RBP11.14□□□□□ -0.63
TPM3-210ENST00000368530 DGKIO75912 1065 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 GTF2F1P35269 517 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM3-210ENST00000368530 LONRF3Q496Y0 759 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 PPP1R18Q6NYC8 613 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 DNAJB3Q8WWF6 145 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 EPSTI1Q96J88 318 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 LMAN2LQ9H0V9 348 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 TRIOO75962 3097 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 C5orf42Q9H799 3197 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 BIN1O00499 593 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 DCXO43602 365 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 CCNT1O60563 726 aaKnown RBP11.14□□□□□ -0.63
TPM3-210ENST00000368530 GABBR2O75899 941 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 DNAJB1P25685 340 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 CTNNB1P35222 781 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 IRS1P35568 1242 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 PNOCQ13519 176 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
TPM3-210ENST00000368530 GRIK4Q16099 956 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 IL17AQ16552 155 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 STX1AQ16623 288 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 KRBA2Q6ZNG9 492 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 C11orf57Q6ZUT1 292 aaPredicted RBP11.14□□□□□ -0.63
TPM3-210ENST00000368530 ADHFE1Q8IWW8 467 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
TPM3-210ENST00000368530 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 CUL5Q93034 780 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 TIGD1Q96MW7 591 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 RIC8AQ9NPQ8 531 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 ERAP1Q9NZ08 941 aa11.14□□□□□ -0.63
TPM3-210ENST00000368530 LINC01565O15544 149 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 MBTPS2O43462 519 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 NCK2O43639 380 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 TBX10O75333 385 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 INSRRP14616 1297 aa11.13□□□□□ -0.63
TPM3-210ENST00000368530 MARK3P27448 753 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms