RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SARSP49591 514 aaKnown RBP21.21■□□□□ 0.99
CKS1B-203ENST00000368439 TOB1P50616 345 aaPredicted RBP21.21■□□□□ 0.99
CKS1B-203ENST00000368439 EPC2Q52LR7 807 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 C4orf32Q8N8J7 132 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 CEP170P1Q96L14 293 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 ADAM2Q99965 735 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 ATG2AQ2TAZ0 1938 aa21.21■□□□□ 0.99
CKS1B-203ENST00000368439 POTEMA6NI47 508 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 TRAPPC10P48553 1259 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 FAM189BP81408 668 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 TTC38Q5R3I4 469 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 TPH2Q8IWU9 490 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 TMEM192Q8IY95 271 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 FBXO22Q8NEZ5 403 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 NEK9Q8TD19 979 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 SAMD11Q96NU1 681 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 C1orf112Q9NSG2 853 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 LMCD1Q9NZU5 365 aa21.2■□□□□ 0.98
CKS1B-203ENST00000368439 SUCLA2Q9P2R7 463 aaPredicted RBP21.2■□□□□ 0.98
CKS1B-203ENST00000368439 A0A087WZ62 844 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 GTPBP6O43824 516 aaPredicted RBP21.19■□□□□ 0.98
CKS1B-203ENST00000368439 STAG3L1P0CL83 205 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 SPATA31C1P0DKV0 1188 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 GJB2P29033 226 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 RFC5P40937 340 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 DNM2P50570 870 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 CDC42EP1Q00587 391 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 NBR1Q14596 966 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 SLC24A5Q71RS6 500 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 KSR1Q8IVT5 923 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 FIBCD1Q8N539 461 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 NLRP7Q8WX94 980 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 CLP1Q92989 425 aaKnown RBP21.19■□□□□ 0.98
CKS1B-203ENST00000368439 JPH2Q9BR39 696 aaPredicted RBP21.19■□□□□ 0.98
CKS1B-203ENST00000368439 FDXACB1Q9BRP7 624 aaPredicted RBP21.19■□□□□ 0.98
CKS1B-203ENST00000368439 VCANP13611 3396 aa21.19■□□□□ 0.98
CKS1B-203ENST00000368439 DENND3A2RUS2 1198 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 C5orf67F2Z3F1 127 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 OR52Z1P0C646 297 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 FGFR4P22455 802 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 GATMP50440 423 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 GNL2Q13823 731 aaKnown RBP21.18■□□□□ 0.98
CKS1B-203ENST00000368439 OTUD6AQ7L8S5 288 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 ZNF410Q86VK4 478 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 RHPN2Q8IUC4 686 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 CMTR2Q8IYT2 770 aaKnown RBP21.18■□□□□ 0.98
CKS1B-203ENST00000368439 SLC7A3Q8WY07 619 aa21.18■□□□□ 0.98
CKS1B-203ENST00000368439 H3BNC9 293 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 TECP42680 631 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 POLGP54098 1239 aaPredicted RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 BTG3Q14201 252 aaPredicted RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 XKR9Q5GH70 373 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 EXOC8Q8IYI6 725 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 MICALL1Q8N3F8 863 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 TMEM143Q96AN5 459 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 GCOM2Q9BZD3 368 aaPredicted RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 IFT122Q9HBG6 1241 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 XPNPEP1Q9NQW7 623 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 ANKEF1Q9NU02 776 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 NOL7Q9UMY1 257 aaKnown RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 KIF3AQ9Y496 699 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 PCDHB6Q9Y5E3 794 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 MRPL42Q9Y6G3 142 aaKnown RBP21.17■□□□□ 0.98
CKS1B-203ENST00000368439 XIRP2A4UGR9 3374 aa21.17■□□□□ 0.98
CKS1B-203ENST00000368439 BMPR1AP36894 532 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 EMC2Q15006 297 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 CATSPER3Q86XQ3 398 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 PRPF31Q8WWY3 499 aaKnown RBP21.16■□□□□ 0.98
CKS1B-203ENST00000368439 SCLT1Q96NL6 688 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 ELAC1Q9H777 363 aaKnown RBP21.16■□□□□ 0.98
CKS1B-203ENST00000368439 BMP2KQ9NSY1 1161 aaPredicted RBP21.16■□□□□ 0.98
CKS1B-203ENST00000368439 PCDHB7Q9Y5E2 793 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 COL4A3BPQ9Y5P4 624 aa21.16■□□□□ 0.98
CKS1B-203ENST00000368439 A0A087WWV3 80 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 MED24O75448 989 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 RARRES1P49788 294 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 GPM6BQ13491 265 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 CUL4AQ13619 759 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 FAM102BQ5T8I3 360 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 POLR3CQ9BUI4 534 aaPredicted RBP21.15■□□□□ 0.98
CKS1B-203ENST00000368439 TUFT1Q9NNX1 390 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 RNF19AQ9NV58 838 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 TMEM161AQ9NX61 479 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 LRFN2Q9ULH4 789 aa21.15■□□□□ 0.98
CKS1B-203ENST00000368439 GAS2O43903 313 aaKnown RBP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 RB1P06400 928 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 XRCC6P12956 609 aaKnown RBP eCLIP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 CTNNB1P35222 781 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 FXR2P51116 673 aaKnown RBP eCLIP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 PAN2Q504Q3 1202 aaKnown RBP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 PIGOQ8TEQ8 1089 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 PSPC1Q8WXF1 523 aaKnown RBP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 NLRP4Q96MN2 994 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.14■□□□□ 0.97
CKS1B-203ENST00000368439 SMC3Q9UQE7 1217 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 RWDD3Q9Y3V2 267 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
CKS1B-203ENST00000368439 MYO7AQ13402 2215 aa21.13■□□□□ 0.97
CKS1B-203ENST00000368439 ZSCAN20P17040 1043 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms