RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ZNF410Q86VK4 478 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 RHPN2Q8IUC4 686 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 SLC17A8Q8NDX2 589 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 CCDC43Q96MW1 224 aaKnown RBP26.72■■□□□ 1.87
PFDN2-201ENST00000368010 GCOM2Q9BZD3 368 aaPredicted RBP26.72■■□□□ 1.87
PFDN2-201ENST00000368010 RGS18Q9NS28 235 aa26.72■■□□□ 1.87
PFDN2-201ENST00000368010 ZBTB39O15060 712 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 GAS2O43903 313 aaKnown RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 DGKIO75912 1065 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 SARSP49591 514 aaKnown RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 GRB10Q13322 594 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 LARP1BQ659C4 914 aaKnown RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 SLC24A5Q71RS6 500 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 FIBCD1Q8N539 461 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 ERMNQ8TAM6 284 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 C17orf80Q9BSJ5 609 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 RC3H2Q9HBD1 1191 aaKnown RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 TUFT1Q9NNX1 390 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 BMP2KQ9NSY1 1161 aaPredicted RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 ANKEF1Q9NU02 776 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 RNF216Q9NWF9 866 aaPredicted RBP26.71■■□□□ 1.87
PFDN2-201ENST00000368010 LRFN2Q9ULH4 789 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 PCDHB6Q9Y5E3 794 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 COL6A3P12111 3177 aa26.71■■□□□ 1.87
PFDN2-201ENST00000368010 TTC3P53804 2025 aa26.7■■□□□ 1.87
PFDN2-201ENST00000368010 MYO9BQ13459 2157 aa26.7■■□□□ 1.87
PFDN2-201ENST00000368010 A0A087WZ62 844 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 POU3F3P20264 500 aaPredicted RBP26.7■■□□□ 1.86
PFDN2-201ENST00000368010 IBSPP21815 317 aaPredicted RBP26.7■■□□□ 1.86
PFDN2-201ENST00000368010 EMC2Q15006 297 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 RILPL1Q5EBL4 403 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 CRIPAKQ8N1N5 446 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 TCP11Q8WWU5 503 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 PSPC1Q8WXF1 523 aaKnown RBP26.7■■□□□ 1.86
PFDN2-201ENST00000368010 PPM1EQ8WY54 764 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 ZNF689Q96CS4 500 aaPredicted RBP26.7■■□□□ 1.86
PFDN2-201ENST00000368010 NLRP4Q96MN2 994 aa26.7■■□□□ 1.86
PFDN2-201ENST00000368010 FDXACB1Q9BRP7 624 aaPredicted RBP26.7■■□□□ 1.86
PFDN2-201ENST00000368010 ZSCAN20P17040 1043 aaPredicted RBP26.69■■□□□ 1.86
PFDN2-201ENST00000368010 BTG3Q14201 252 aaPredicted RBP26.69■■□□□ 1.86
PFDN2-201ENST00000368010 C4orf32Q8N8J7 132 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 FBXO22Q8NEZ5 403 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 GDPD5Q8WTR4 605 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 TMEM143Q96AN5 459 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 MTRQ99707 1265 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 INO80BQ9C086 356 aaPredicted RBP26.69■■□□□ 1.86
PFDN2-201ENST00000368010 PCDHB7Q9Y5E2 793 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 COL4A3BPQ9Y5P4 624 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 MTCH2Q9Y6C9 303 aa26.69■■□□□ 1.86
PFDN2-201ENST00000368010 C9IYK1 514 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 SPATA31C1P0DKV0 1188 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 FXR2P51116 673 aaKnown RBP eCLIP26.68■■□□□ 1.86
PFDN2-201ENST00000368010 PTGDRQ13258 359 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 DSC3Q14574 896 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 EPC2Q52LR7 807 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 HAUS3Q68CZ6 603 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 CATSPER3Q86XQ3 398 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 KSR1Q8IVT5 923 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 MICALL1Q8N3F8 863 aa26.68■■□□□ 1.86
PFDN2-201ENST00000368010 POLR3CQ9BUI4 534 aaPredicted RBP26.68■■□□□ 1.86
PFDN2-201ENST00000368010 CHD7Q9P2D1 2997 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 COL4A4P53420 1690 aaPredicted RBP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 LAD1O00515 517 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 LPXNO60711 386 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 MED24O75448 989 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 DGAT1O75907 488 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 XRCC6P12956 609 aaKnown RBP eCLIP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 SFPQP23246 707 aaKnown RBP eCLIP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 RARRES1P49788 294 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 CCDC85BQ15834 202 aaPredicted RBP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 TMEM192Q8IY95 271 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 CMTR2Q8IYT2 770 aaKnown RBP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 PIGOQ8TEQ8 1089 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 PRPF31Q8WWY3 499 aaKnown RBP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.67■■□□□ 1.86
PFDN2-201ENST00000368010 RWDD3Q9Y3V2 267 aa26.67■■□□□ 1.86
PFDN2-201ENST00000368010 CSDE1O75534 798 aaKnown RBP26.66■■□□□ 1.86
PFDN2-201ENST00000368010 FGFR4P22455 802 aa26.66■■□□□ 1.86
PFDN2-201ENST00000368010 RPA1P27694 616 aa26.66■■□□□ 1.86
PFDN2-201ENST00000368010 RAB34Q9BZG1 259 aa26.66■■□□□ 1.86
PFDN2-201ENST00000368010 ATP6V0A4Q9HBG4 840 aa26.66■■□□□ 1.86
PFDN2-201ENST00000368010 XPNPEP1Q9NQW7 623 aa26.66■■□□□ 1.86
PFDN2-201ENST00000368010 ARID2Q68CP9 1835 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 ASAP2O43150 1006 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 NACC1Q96RE7 527 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 ELAC1Q9H777 363 aaKnown RBP26.65■■□□□ 1.86
PFDN2-201ENST00000368010 TMEM161AQ9NX61 479 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 LMCD1Q9NZU5 365 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 LRWD1Q9UFC0 647 aa26.65■■□□□ 1.86
PFDN2-201ENST00000368010 PDCP20941 246 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 CTNNB1P35222 781 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 PRPHP41219 470 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 FAM189BP81408 668 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 LAMTOR4Q0VGL1 99 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 PAN2Q504Q3 1202 aaKnown RBP26.64■■□□□ 1.86
PFDN2-201ENST00000368010 POTEGQ6S5H5 508 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 FERMT3Q86UX7 667 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 IFT122Q9HBG6 1241 aa26.64■■□□□ 1.86
PFDN2-201ENST00000368010 CHST12Q9NRB3 414 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms