RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PKD1L2Q7Z442 2459 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 MEIS2O14770 477 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 SPTLC1O15269 473 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
VAMP4-202ENST00000367740 MTMR1Q13613 665 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 SEC23AQ15436 765 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 KIAA0319LQ8IZA0 1049 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 SLC44A3Q8N4M1 653 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 PJA1Q8NG27 643 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
VAMP4-202ENST00000367740 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 OSMRQ99650 979 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 JPH1Q9HDC5 661 aaPredicted RBP16.8■□□□□ 0.28
VAMP4-202ENST00000367740 ARHGEF3Q9NR81 526 aa16.8■□□□□ 0.28
VAMP4-202ENST00000367740 ANKRD11Q6UB99 2663 aaPredicted RBP16.8■□□□□ 0.28
VAMP4-202ENST00000367740 CTSAP10619 480 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 KLRC1P26715 233 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 BCAR1P56945 870 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
VAMP4-202ENST00000367740 GRM4Q14833 912 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 KIZQ2M2Z5 673 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 TMEM169Q96HH4 297 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 FOXQ1Q9C009 403 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
VAMP4-202ENST00000367740 MYH15Q9Y2K3 1946 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 LRRN2O75325 713 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 TGM1P22735 817 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 ZNF528Q3MIS6 628 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 C15orf39Q6ZRI6 1047 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 PLPPR4Q7Z2D5 763 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 SLC9A2Q9UBY0 812 aa16.78■□□□□ 0.28
VAMP4-202ENST00000367740 SMG5Q9UPR3 1016 aaKnown RBP16.78■□□□□ 0.28
VAMP4-202ENST00000367740 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 STAT5BP51692 787 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 CLCN4P51793 760 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 CRYBB1P53674 252 aaPredicted RBP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 POLGP54098 1239 aaPredicted RBP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 GIT2Q14161 759 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 NONOQ15233 471 aaKnown RBP eCLIP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 RNF169Q8NCN4 708 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 HELQQ8TDG4 1101 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
VAMP4-202ENST00000367740 CUL5Q93034 780 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 EPS15L1Q9UBC2 864 aa16.77■□□□□ 0.28
VAMP4-202ENST00000367740 GPR32O75388 356 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 ACTR2P61160 394 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 WTAPQ15007 396 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 PPM1JQ5JR12 505 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
VAMP4-202ENST00000367740 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 PIBF1Q8WXW3 757 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 BORCS6Q96GS4 357 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 MYADMQ96S97 322 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 KRT23Q9C075 422 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 PARD6AQ9NPB6 346 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 FBXO4Q9UKT5 387 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 USP18Q9UMW8 372 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 PCDHGA2Q9Y5H1 932 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 CEP295Q9C0D2 2601 aa16.76■□□□□ 0.27
VAMP4-202ENST00000367740 CLUHO75153 1309 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 HOXB3P14651 431 aaPredicted RBP16.75■□□□□ 0.27
VAMP4-202ENST00000367740 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 CYB5R4Q7L1T6 521 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 ZNF598Q86UK7 904 aaKnown RBP16.75■□□□□ 0.27
VAMP4-202ENST00000367740 ZBTB44Q8NCP5 570 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 SECISBP2LQ93073 1101 aaKnown RBP16.75■□□□□ 0.27
VAMP4-202ENST00000367740 VN1R3Q9BXE9 311 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 MRPL9Q9BYD2 267 aaKnown RBP16.75■□□□□ 0.27
VAMP4-202ENST00000367740 JADE2Q9NQC1 790 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 COL1A2P08123 1366 aa16.75■□□□□ 0.27
VAMP4-202ENST00000367740 FASNP49327 2511 aaKnown RBP16.74■□□□□ 0.27
VAMP4-202ENST00000367740 ZC3H11AO75152 810 aaKnown RBP eCLIP16.74■□□□□ 0.27
VAMP4-202ENST00000367740 VTNP04004 478 aa16.74■□□□□ 0.27
VAMP4-202ENST00000367740 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
VAMP4-202ENST00000367740 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
VAMP4-202ENST00000367740 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
VAMP4-202ENST00000367740 IGSF21Q96ID5 467 aa16.74■□□□□ 0.27
VAMP4-202ENST00000367740 WDR6Q9NNW5 1121 aaKnown RBP16.74■□□□□ 0.27
VAMP4-202ENST00000367740 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
VAMP4-202ENST00000367740 ZFYVE26Q68DK2 2539 aa16.74■□□□□ 0.27
VAMP4-202ENST00000367740 WDFY3Q8IZQ1 3526 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 MAFGO15525 162 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 LAMTOR5O43504 91 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 HBP1O60381 514 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 SLC26A2P50443 739 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 PDE1AP54750 535 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 STARD6P59095 220 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
VAMP4-202ENST00000367740 ACAP1Q15027 740 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 ATRIPQ8WXE1 791 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms