RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 KRIT1O00522 736 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 CYP26A1O43174 497 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 FGGP02679 453 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 GJB1P08034 283 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ACOT2P49753 483 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 CLK2P49760 499 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 GALCP54803 685 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 GNGT1P63211 74 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 GPS2Q13227 327 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 BRD3Q15059 726 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 RPS6KA1Q15418 735 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 MEA1Q16626 185 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 STRIP1Q5VSL9 837 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 PADI6Q6TGC4 694 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 CCNI2Q6ZMN8 369 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 TAX1BP1Q86VP1 789 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 TRIM58Q8NG06 486 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 CASKIN2Q8WXE0 1202 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 FAM163AQ96GL9 167 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 PAGR1Q9BTK6 254 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 NEUROG2Q9H2A3 272 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ARHGEF10LQ9HCE6 1279 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 KCNMB3Q9NPA1 279 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 KCND1Q9NSA2 647 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 CTTNBP2NLQ9P2B4 639 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 SWAP70Q9UH65 585 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 PPP1R9AQ9ULJ8 1098 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ROBO3Q96MS0 1386 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 PVALEFA0A1B0GWK0 134 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 DDX3XO00571 662 aaKnown RBP eCLIP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 WNT10BO00744 389 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 RPS6P62753 249 aaKnown RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 IRX5P78411 483 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 LRRC63Q05C16 580 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 HHIPL2Q6UWX4 724 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 SEPT14Q6ZU15 432 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 MDM1Q8TC05 714 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 AFAP1L1Q8TED9 768 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 KRT35Q92764 455 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 SLC35C1Q96A29 364 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 TMEM143Q96AN5 459 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ZIM3Q96PE6 472 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 LBHD1Q9BQE6 289 aaPredicted RBP6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 NUP58Q9BVL2 599 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 NT5C3AQ9H0P0 336 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 C10orf88Q9H8K7 445 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 SNX24Q9Y343 169 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 JRKLQ9Y4A0 524 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 UNC80Q8N2C7 3258 aa6.13□□□□□ -1.43
TNFSF4-202ENST00000367718 DDX60LQ5H9U9 1706 aaKnown RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 AGPSO00116 658 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 IFNAR2P48551 515 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PPATQ06203 517 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PPP3CAQ08209 521 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ITGB3BPQ13352 177 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 BAATQ14032 418 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PDIA5Q14554 519 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CEP55Q53EZ4 464 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PPP4R3AQ6IN85 833 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 HS2ST1Q7LGA3 356 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 OTOP1Q7RTM1 612 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ELOA2Q8IYF1 753 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 METTL13Q8N6R0 699 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ATG4AQ8WYN0 398 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PARVGQ9HBI0 331 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PCDHA2Q9Y5H9 948 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 MRPL42Q9Y6G3 142 aaKnown RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ZHX2Q9Y6X8 837 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CASZ1Q86V15 1759 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TIAM2Q8IVF5 1701 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ANKRD63C9JTQ0 380 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 SGPL1O95470 568 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 SERPING1P05155 500 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TNFAIP3P21580 790 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 RPA1P27694 616 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TNIP1Q15025 636 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CT47A1Q5JQC4 288 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TMEM63BQ5T3F8 832 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 RNF187Q5TA31 235 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CCDC70Q6NSX1 233 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 SCARA5Q6ZMJ2 495 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ZBTB33Q86T24 672 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TRIM50Q86XT4 487 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CCDC33Q8N5R6 958 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 TTLL6Q8N841 843 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 LNX1Q8TBB1 728 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 ZBTB45Q96K62 511 aaPredicted RBP6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 CCDC17Q96LX7 622 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 RMDN3Q96TC7 470 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 DOCK2Q92608 1830 aa6.12□□□□□ -1.43
TNFSF4-202ENST00000367718 O00370 1275 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms