RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 COL9A1P20849 921 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 FGFR4P22455 802 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 PTGDRQ13258 359 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
SF3B5-201ENST00000367569 IER5Q5VY09 327 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 TSHZ1Q6ZSZ6 1077 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
SF3B5-201ENST00000367569 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 MED24O75448 989 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 CSDE1O75534 798 aaKnown RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 SLITRK3O94933 977 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 YWHABP31946 246 aaKnown RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 PAK2Q13177 524 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 XKR9Q5GH70 373 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 C4orf32Q8N8J7 132 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 PIGOQ8TEQ8 1089 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 SAMD11Q96NU1 681 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 UBE2ZQ9H832 354 aaPredicted RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
SF3B5-201ENST00000367569 RAPGEFL1Q9UHV5 662 aa16.39■□□□□ 0.21
SF3B5-201ENST00000367569 H3BNC9 293 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 ENPP3O14638 875 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 TRAPPC10P48553 1259 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 POLGP54098 1239 aaPredicted RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 NLRP11P59045 1033 aaKnown RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 NFX1Q12986 1120 aaKnown RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 GPM6BQ13491 265 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 EMC2Q15006 297 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 IL17AQ16552 155 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 MRPL38Q96DV4 380 aaKnown RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 NIFKQ9BYG3 293 aaKnown RBP16.38■□□□□ 0.21
SF3B5-201ENST00000367569 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
SF3B5-201ENST00000367569 TTC3P53804 2025 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 MAGEB2O15479 319 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 MGEA5O60502 916 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 GPR32O75388 356 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 RPS6KA5O75582 802 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 SPATA31C1P0DKV0 1188 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 SYT1P21579 422 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 CDC25AP30304 524 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 GPC3P51654 580 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 FAM228AQ86W67 206 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 NLRP7Q8WX94 980 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 SNX21Q969T3 373 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 NLRP4Q96MN2 994 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 TMX1Q9H3N1 280 aa16.37■□□□□ 0.21
SF3B5-201ENST00000367569 RALGAPA2Q2PPJ7 1873 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 KCNA5P22460 613 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 CCT6AP40227 531 aaKnown RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 RESTQ13127 1097 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ECM1Q16610 540 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 PTPROQ16827 1216 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 MAEAQ7L5Y9 396 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 FIBCD1Q8N539 461 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 HSD17B14Q9BPX1 270 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ADAMTS10Q9H324 1103 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 EPHX3Q9H6B9 360 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 RC3H2Q9HBD1 1191 aaKnown RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ERVK-5Q9HDB9 667 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 SUCLA2Q9P2R7 463 aaPredicted RBP16.36■□□□□ 0.21
SF3B5-201ENST00000367569 LRWD1Q9UFC0 647 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 KDM3AQ9Y4C1 1321 aa16.36■□□□□ 0.21
SF3B5-201ENST00000367569 ATG2AQ2TAZ0 1938 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 A0A087WZ62 844 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
SF3B5-201ENST00000367569 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 TMOD1P28289 359 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 GATMP50440 423 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 LEXMQ3ZCV2 418 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
SF3B5-201ENST00000367569 NME8Q8N427 588 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
SF3B5-201ENST00000367569 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 SNX29Q8TEQ0 813 aa16.35■□□□□ 0.21
SF3B5-201ENST00000367569 SLC7A3Q8WY07 619 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms