RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 ZNF577Q9BSK1 485 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 APOBEC2Q9Y235 224 aaKnown RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 DIAPH2O60879 1101 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 PYGLP06737 847 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 VCAM1P19320 739 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 POLA2Q14181 598 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 SWT1Q5T5J6 900 aaKnown RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 ELOA2Q8IYF1 753 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 TTC16Q8NEE8 873 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 MCPH1Q8NEM0 835 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 DACT3Q96B18 629 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
SYNE1-209ENST00000367257 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 CPSF3Q9UKF6 684 aaKnown RBP9.53□□□□□ -0.88
SYNE1-209ENST00000367257 ZNF804BA4D1E1 1349 aa9.52□□□□□ -0.88
SYNE1-209ENST00000367257 NLRP1Q9C000 1473 aa9.52□□□□□ -0.88
SYNE1-209ENST00000367257 E2F6O75461 281 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 TADA3O75528 432 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 DPCR1Q3MIW9 517 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PAGE5Q96GU1 130 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 DISC1Q9NRI5 854 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 INTUQ9ULD6 942 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PNMA6FA0A0J9YX94 578 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 ARHGEF9O43307 516 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 KCNA4P22459 653 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 CA4P22748 312 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 COPB2P35606 906 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PAWRQ96IZ0 340 aaKnown RBP9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PITPNM3Q9BZ71 974 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 NDEL1Q9GZM8 345 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 WNT8AQ9H1J5 351 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PALD1Q9ULE6 856 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
SYNE1-209ENST00000367257 SNX5Q9Y5X3 404 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 EIF4E1BA6NMX2 242 aaKnown RBP9.52□□□□□ -0.89
SYNE1-209ENST00000367257 EFCAB14O75071 495 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 ZBED1O96006 694 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 PECAM1P16284 738 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-209ENST00000367257 MED21Q13503 144 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 TBC1D9BQ66K14 1250 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 CPXCR1Q8N123 301 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 DEPDC1BQ8WUY9 529 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 ATP6V1E2Q96A05 226 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 UBE4BO95155 1302 aa9.52□□□□□ -0.89
SYNE1-209ENST00000367257 LRRIQ4A6NIV6 560 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 COPEO14579 308 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 DLATP10515 647 aaKnown RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 KRT4P19013 534 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 OSBPP22059 807 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SERPINB10P48595 397 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 CHRNDQ07001 517 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ITKQ08881 620 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ALKBH5Q6P6C2 394 aaKnown RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 TMEM154Q6P9G4 183 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 EFHBQ8N7U6 833 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 KCTD6Q8NC69 237 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ALKBH8Q96BT7 664 aaKnown RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 FAM20AQ96MK3 541 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ASNSD1Q9NWL6 643 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SLC4A7Q9Y6M7 1214 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 PSMD3O43242 534 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 A1BGP04217 495 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SMARCA1P28370 1054 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 CCDC15Q0P6D6 951 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 RCN2Q14257 317 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 MAEAQ7L5Y9 396 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 STAMQ92783 540 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SPATA17Q96L03 361 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SH3GL2Q99962 352 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 INO80BQ9C086 356 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 TTLL3Q9Y4R7 772 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 FMN2Q9NZ56 1722 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 KRT7P08729 469 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ALAS1P13196 640 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 MMP14P50281 582 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 HSPA2P54652 639 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ILF2Q12905 390 aaKnown RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 KCTD2Q14681 263 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ALX1Q15699 326 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 ARHGAP27Q6ZUM4 889 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 TMEM35BQ8NCS4 154 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 GJA10Q969M2 543 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 IL17RAQ96F46 866 aa9.51□□□□□ -0.89
SYNE1-209ENST00000367257 GPR101Q96P66 508 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-209ENST00000367257 SEPT10Q9P0V9 454 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms