RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 ATP9AO75110 1047 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 E2F6O75461 281 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 RCN1Q15293 331 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 ALX1Q15699 326 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 VWA3BQ502W6 1294 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 RBM43Q6ZSC3 357 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 TMTC3Q6ZXV5 915 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 ATP2A3Q93084 1043 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 IFT122Q9HBG6 1241 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 CAPN9O14815 690 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 H2AFZP0C0S5 128 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 VHLP40337 213 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
PRKN-206ENST00000366898 CCDC15Q0P6D6 951 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 H2AFVQ71UI9 128 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 TXNRD3Q86VQ6 643 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 SLC26A7Q8TE54 656 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 GDAQ9Y2T3 454 aa12.58□□□□□ -0.4
PRKN-206ENST00000366898 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 SMCO2A6NFE2 343 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 GIPC1O14908 333 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 MRPS15P82914 257 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 ISLR2Q6UXK2 745 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 PAGE5Q96GU1 130 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 CNOT6LQ96LI5 555 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 NT5C3AQ9H0P0 336 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 TBC1D23Q9NUY8 699 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 BTBD7Q9P203 1132 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 SUCLA2Q9P2R7 463 aaPredicted RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 TCRBV5S4A2TA0A5A2 114 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 MAN1A2O60476 641 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 EEF1B2P24534 225 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 NTRK3Q16288 839 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 FERMT1Q9BQL6 677 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 AMACRQ9UHK6 382 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 FGFR2P21802 821 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 RNF220Q5VTB9 566 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 TTC16Q8NEE8 873 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 PIGOQ8TEQ8 1089 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 RBM41Q96IZ5 413 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 EPAS1Q99814 870 aa12.57□□□□□ -0.4
PRKN-206ENST00000366898 DDX50Q9BQ39 737 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 ARIH1Q9Y4X5 557 aaPredicted RBP12.57□□□□□ -0.4
PRKN-206ENST00000366898 PYGBP11216 843 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 PTPAQ15257 358 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 C17orf50Q8WW18 174 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 MAML1Q92585 1016 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 CATSPER2Q96P56 530 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 DBR1Q9UK59 544 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 SLIT3O75094 1523 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 HAUS5O94927 633 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 PDZD8Q8NEN9 1154 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 SREK1Q8WXA9 508 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 GIMAP4Q9NUV9 329 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 ATP11BQ9Y2G3 1177 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 R3HDM2Q9Y2K5 976 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 DPPA5A6NC42 116 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 EIF2B2P49770 351 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 AP2B1P63010 937 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
PRKN-206ENST00000366898 ZNF180Q9UJW8 692 aa12.56□□□□□ -0.4
PRKN-206ENST00000366898 PRPF3O43395 683 aaKnown RBP12.55□□□□□ -0.4
PRKN-206ENST00000366898 PGM1P36871 562 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
PRKN-206ENST00000366898 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
PRKN-206ENST00000366898 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms