RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ERMARDQ5T6L9 678 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 CATSPER3Q86XQ3 398 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 ALG3Q92685 438 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 CUL5Q93034 780 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 C18orf8Q96DM3 657 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 NT5C3AQ9H0P0 336 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 MLXIPLQ9NP71 852 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SUCLA2Q9P2R7 463 aaPredicted RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 BHMG1C9JSJ3 638 aaPredicted RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 CLSTN1O94985 981 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 GCNT3O95395 438 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 FGFR4P22455 802 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 MARCKSL1P49006 195 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SLC12A3P55017 1021 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 RHBDL3P58872 404 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 POU5F1Q01860 360 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 ORC2Q13416 577 aaPredicted RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 LRRC14Q15048 493 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 KNOP1Q1ED39 458 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 RASGEF1CQ8N431 466 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 MGARPQ8TDB4 240 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 EPS8L3Q8TE67 593 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 SLC35C1Q96A29 364 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 HES6Q96HZ4 224 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 PRMT1Q99873 361 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 FAM129AQ9BZQ8 928 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SEMA4AQ9H3S1 761 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SLITRK6Q9H5Y7 841 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 L3MBTL1Q9Y468 752 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 CES2O00748 559 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 LRRN2O75325 713 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 NR3C1P04150 777 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 LDHCP07864 332 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 ELF3P78545 371 aaPredicted RBP14.73□□□□□ -0.05
PRKN-205ENST00000366897 GIT2Q14161 759 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 COG2Q14746 738 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 SLFN11Q7Z7L1 901 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 CCDC197Q8NCU1 140 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 PNMA6FA0A0J9YX94 578 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 BTNL10A8MVZ5 291 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 PAEPP09466 180 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 CDC25CP30307 473 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 ARHGAP44Q17R89 818 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 MFSD14BQ5SR56 506 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 OTUD6AQ7L8S5 288 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■■■ 41.5
PRKN-205ENST00000366897 P2RX7Q99572 595 aaKnown RBP14.73□□□□□ -0.05
PRKN-205ENST00000366897 ADAM7Q9H2U9 754 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 FAM114A2Q9NRY5 505 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRKN-205ENST00000366897 DBR1Q9UK59 544 aaKnown RBP14.73□□□□□ -0.05
PRKN-205ENST00000366897 DAAM1Q9Y4D1 1078 aa14.73□□□□□ -0.05
PRKN-205ENST00000366897 CCT8L1PA6NM43 557 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 TRIM49P0CI25 452 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 TRIM49CP0CI26 452 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ADRA2BP18089 450 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 SEPT2Q15019 361 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 EDRF1Q3B7T1 1238 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ZC2HC1CQ53FD0 456 aaPredicted RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 WLSQ5T9L3 541 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 VPS36Q86VN1 386 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 CCDC25Q86WR0 208 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 CPNE8Q86YQ8 564 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 STAMBPL1Q96FJ0 436 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ZNF317Q96PQ6 595 aaPredicted RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 THAP2Q9H0W7 228 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 VEZTQ9HBM0 779 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ABCF3Q9NUQ8 709 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 BZW2Q9Y6E2 419 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 FAM196BA6NMK8 535 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 SRRM3A6NNA2 597 aaPredicted RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 DDX3YO15523 660 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 PPFIA2O75334 1257 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 SKAP2O75563 359 aaPredicted RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 CLK2P49760 499 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 PMS2P54278 862 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 C10orf76Q5T2E6 689 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 TPTE2Q6XPS3 522 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 EIF1ADQ8N9N8 165 aaKnown RBP14.72□□□□□ -0.05
PRKN-205ENST00000366897 KRT35Q92764 455 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 RUSC1Q9BVN2 902 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 BHMT2Q9H2M3 363 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 NOD2Q9HC29 1040 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ZDHHC18Q9NUE0 388 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 DONSONQ9NYP3 566 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 CEP83Q9Y592 693 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ASTN1O14525 1302 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 KDM3AQ9Y4C1 1321 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 LAMB2P55268 1798 aa14.72□□□□□ -0.05
PRKN-205ENST00000366897 ZBTB39O15060 712 aa14.71□□□□□ -0.05
PRKN-205ENST00000366897 UFL1O94874 794 aa14.71□□□□□ -0.05
PRKN-205ENST00000366897 PRKCIP41743 596 aa14.71□□□□□ -0.05
PRKN-205ENST00000366897 CLNS1AP54105 237 aaKnown RBP14.71□□□□□ -0.05
PRKN-205ENST00000366897 XRCC4Q13426 336 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms