RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PAN2Q504Q3 1202 aaKnown RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 C4orf19Q8IY42 314 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 CMTR2Q8IYT2 770 aaKnown RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 MTMR9Q96QG7 549 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 EIF2AK1Q9BQI3 630 aaKnown RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 RGS18Q9NS28 235 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 C1orf112Q9NSG2 853 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
YBX3-203ENST00000366286 MRPL42Q9Y6G3 142 aaKnown RBP11.6□□□□□ -0.55
YBX3-203ENST00000366286 A0A087WZ62 844 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 C5orf67F2Z3F1 127 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 H3BNC9 293 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 DLL1O00548 723 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 ZBTB39O15060 712 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 CSDE1O75534 798 aaKnown RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 FGFR4P22455 802 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 DNM2P50570 870 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 POLGP54098 1239 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 GPM6BQ13491 265 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 SLC24A5Q71RS6 500 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 RHPN2Q8IUC4 686 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 SLC7A3Q8WY07 619 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 CLP1Q92989 425 aaKnown RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 FDXACB1Q9BRP7 624 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 ZSWIM4Q9H7M6 989 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
YBX3-203ENST00000366286 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
YBX3-203ENST00000366286 A0A0C4DFX4 3053 aa11.58□□□□□ -0.55
YBX3-203ENST00000366286 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.55
YBX3-203ENST00000366286 SLITRK3O94933 977 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 OR52Z1P0C646 297 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 RFC5P40937 340 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 ORC2Q13416 577 aaPredicted RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 NBR1Q14596 966 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 EMC2Q15006 297 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 ZNF174Q15697 407 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 TTC38Q5R3I4 469 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 ZNF410Q86VK4 478 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 MRPL38Q96DV4 380 aaKnown RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 NLRP4Q96MN2 994 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 GCOM2Q9BZD3 368 aaPredicted RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 TMEM161AQ9NX61 479 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
YBX3-203ENST00000366286 PCDHB7Q9Y5E2 793 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 XIRP2A4UGR9 3374 aa11.58□□□□□ -0.56
YBX3-203ENST00000366286 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
YBX3-203ENST00000366286 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 GAS2O43903 313 aaKnown RBP11.57□□□□□ -0.56
YBX3-203ENST00000366286 LYPLA2O95372 231 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 FGFR1P11362 822 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 U2AF2P26368 475 aaKnown RBP eCLIP11.57□□□□□ -0.567e-9■□□□□ 10.4
YBX3-203ENST00000366286 BMPR1AP36894 532 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 TRAPPC10P48553 1259 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 MCM2P49736 904 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 TFF2Q03403 129 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 PTPROQ16827 1216 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 FAM102BQ5T8I3 360 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 EXOC8Q8IYI6 725 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
YBX3-203ENST00000366286 TMEM143Q96AN5 459 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 MTRQ99707 1265 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 HSD17B14Q9BPX1 270 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 ELAC1Q9H777 363 aaKnown RBP11.57□□□□□ -0.56
YBX3-203ENST00000366286 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
YBX3-203ENST00000366286 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 MYH11P35749 1972 aa11.57□□□□□ -0.56
YBX3-203ENST00000366286 CSPG5O95196 566 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 RB1P06400 928 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
YBX3-203ENST00000366286 SFPQP23246 707 aaKnown RBP eCLIP11.56□□□□□ -0.56
YBX3-203ENST00000366286 GJB2P29033 226 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 TECP42680 631 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 FAM189BP81408 668 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 MRPS5P82675 430 aaKnown RBP11.56□□□□□ -0.56
YBX3-203ENST00000366286 CDC42EP1Q00587 391 aa11.56□□□□□ -0.56
YBX3-203ENST00000366286 ECHDC2Q86YB7 292 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms