RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SYCE2Q6PIF2 218 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 SKAP1Q86WV1 359 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 LRRC71Q8N4P6 559 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 LINC01465Q8N7H1 131 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 ZNF668Q96K58 619 aaPredicted RBP23.89■■□□□ 1.41
CD47-202ENST00000361309 FAM167AQ96KS9 214 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 ZNF558Q96NG5 402 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 MAP7D2Q96T17 732 aa23.89■■□□□ 1.41
CD47-202ENST00000361309 NGRNQ9NPE2 291 aaKnown RBP23.89■■□□□ 1.41
CD47-202ENST00000361309 CCDC196A0A1B0GTZ2 297 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 CPA1P15085 419 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 EIF4BP23588 611 aaKnown RBP23.88■■□□□ 1.41
CD47-202ENST00000361309 TMOD1P28289 359 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 TMC7Q7Z402 723 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 ECHDC2Q86YB7 292 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 ABI1Q8IZP0 508 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 LRRC43Q8N309 656 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 CCDC12Q8WUD4 166 aaPredicted RBP23.88■■□□□ 1.41
CD47-202ENST00000361309 ASIC4Q96FT7 647 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 PRRX2Q99811 253 aa23.88■■□□□ 1.41
CD47-202ENST00000361309 HMGB1P09429 215 aaKnown RBP23.87■■□□□ 1.41
CD47-202ENST00000361309 SP100P23497 879 aaPredicted RBP23.87■■□□□ 1.41
CD47-202ENST00000361309 CIITAP33076 1130 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 PPM1AP35813 382 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 KRT17Q04695 432 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 TCF15Q12870 199 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 PTPN21Q16825 1174 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 RNF169Q8NCN4 708 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 SPG21Q9NZD8 308 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 CACNA1HO95180 2353 aa23.87■■□□□ 1.41
CD47-202ENST00000361309 WDR64B1ANS9 1081 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 ZNF862O60290 1169 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 OATP04181 439 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 GNA11P29992 359 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 CLLU1OSQ5K130 101 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 LENG9Q96B70 501 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 DISC1Q9NRI5 854 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 NRBP2Q9NSY0 501 aa23.86■■□□□ 1.41
CD47-202ENST00000361309 PRPF3O43395 683 aaKnown RBP23.85■■□□□ 1.41
CD47-202ENST00000361309 HOXB8P17481 243 aaPredicted RBP23.85■■□□□ 1.41
CD47-202ENST00000361309 FGFR4P22455 802 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 GPC3P51654 580 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 VCPP55072 806 aaKnown RBP23.85■■□□□ 1.41
CD47-202ENST00000361309 PRKCEQ02156 737 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 Q6ZUG5 572 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 ZNF710Q8N1W2 664 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 PHKBQ93100 1093 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 CDH22Q9UJ99 828 aa23.85■■□□□ 1.41
CD47-202ENST00000361309 DARSP14868 501 aaKnown RBP23.84■■□□□ 1.41
CD47-202ENST00000361309 UGCGQ16739 394 aa23.84■■□□□ 1.41
CD47-202ENST00000361309 ZBTB33Q86T24 672 aa23.84■■□□□ 1.41
CD47-202ENST00000361309 HELQQ8TDG4 1101 aa23.84■■□□□ 1.41
CD47-202ENST00000361309 BRF1Q92994 677 aa23.84■■□□□ 1.41
CD47-202ENST00000361309 SCLT1Q96NL6 688 aa23.84■■□□□ 1.41
CD47-202ENST00000361309 A0A0U1RQF3 1178 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 MSH4O15457 936 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 EDIL3O43854 480 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 SMC1AQ14683 1233 aaKnown RBP23.83■■□□□ 1.41
CD47-202ENST00000361309 ZNF598Q86UK7 904 aaKnown RBP23.83■■□□□ 1.41
CD47-202ENST00000361309 SLC39A11Q8N1S5 342 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 MRPL43Q8N983 215 aaKnown RBP23.83■■□□□ 1.41
CD47-202ENST00000361309 BICD2Q8TD16 824 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 CASP10Q92851 521 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 HCFC2Q9Y5Z7 792 aa23.83■■□□□ 1.41
CD47-202ENST00000361309 NID2Q14112 1375 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 CHMP2AO43633 222 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 CSDE1O75534 798 aaKnown RBP23.82■■□□□ 1.4
CD47-202ENST00000361309 EOMESO95936 686 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 AVPR2P30518 371 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 AKAP17AQ02040 695 aaKnown RBP23.82■■□□□ 1.4
CD47-202ENST00000361309 TBC1D8BQ0IIM8 1120 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 NLRP7Q8WX94 980 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 CCDC136Q96JN2 1154 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 NR2E1Q9Y466 385 aa23.82■■□□□ 1.4
CD47-202ENST00000361309 C2orf71A6NGG8 1288 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 NT5C1B-RDH14C9J2C7 533 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 GAS7O60861 476 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 TPRNQ4KMQ1 711 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 GJA10Q969M2 543 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 JAKMIP1Q96N16 626 aaKnown RBP23.81■■□□□ 1.4
CD47-202ENST00000361309 RIT2Q99578 217 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 DACT1Q9NYF0 836 aa23.81■■□□□ 1.4
CD47-202ENST00000361309 ZFHX2Q9C0A1 2572 aaPredicted RBP23.81■■□□□ 1.4
CD47-202ENST00000361309 CLASP2O75122 1294 aaKnown RBP23.8■■□□□ 1.4
CD47-202ENST00000361309 CDC45O75419 566 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 SFNP31947 248 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 CA8P35219 290 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 BCAR1P56945 870 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 DRP2Q13474 957 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 NTRK3Q16288 839 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 LRCH2Q5VUJ6 765 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 CES5AQ6NT32 575 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 CCDC148Q8NFR7 591 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 SLC5A5Q92911 643 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 TEKT3Q9BXF9 490 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 MRPL9Q9BYD2 267 aaKnown RBP23.8■■□□□ 1.4
CD47-202ENST00000361309 ADAM7Q9H2U9 754 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 UNC45AQ9H3U1 944 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 POMKQ9H5K3 350 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms