RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ENAHQ8N8S7 591 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 DNAJB3Q8WWF6 145 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 ZC3H10Q96K80 434 aaKnown RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 GPCPD1Q9NPB8 672 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 DKK4Q9UBT3 224 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 PCDHGA5Q9Y5G8 931 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 PCDH15Q96QU1 1955 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 UPP2O95045 317 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 EPN2O95208 641 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 RAP1GAPP47736 663 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 RAB27AP51159 221 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 TBC1D10CQ8IV04 446 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 SIX5Q8N196 739 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 LSM14AQ8ND56 463 aaKnown RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 CDV3Q9UKY7 258 aaKnown RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 PARP1P09874 1014 aaKnown RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 PFKPQ01813 784 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 MCMDC2Q4G0Z9 681 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 MFSD1Q9H3U5 465 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 LIMD1Q9UGP4 676 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 GVINP1Q7Z2Y8 2422 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 CFAP54Q96N23 3096 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 OBSL1O75147 1896 aa6.89□□□□□ -1.31
CDC42SE2-201ENST00000360515 NEDD4P46934 1319 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 hCG_1984214I3L0E3 225 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 TK2O00142 265 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 LAMP2P13473 410 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 INSRRP14616 1297 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 DCLRE1AQ6PJP8 1040 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 ZNF713Q8N859 430 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 LY9Q9HBG7 655 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 LTB4R2Q9NPC1 389 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 PCDHA1Q9Y5I3 950 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 DMXL1Q9Y485 3027 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 PTPRDP23468 1912 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 POTEMA6NI47 508 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 MAGEB2O15479 319 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 ARP10275 920 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 RBM10P98175 930 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 DSG1Q02413 1049 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 FAM9BQ8IZU0 186 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 EMILIN2Q9BXX0 1053 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 SALL2Q9Y467 1007 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 NEUROG3Q9Y4Z2 214 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 SPTBN4Q9H254 2564 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 M0QZ92 97 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 ITGB5P18084 799 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 BCAR1P56945 870 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 DSC1Q08554 894 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 TARBP2Q15633 366 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 MLF2Q15773 248 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 FAM102BQ5T8I3 360 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 CYFIP1Q7L576 1253 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 IFNLR1Q8IU57 520 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 KRT23Q9C075 422 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 LRFN2Q9ULH4 789 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 ST3GAL5Q9UNP4 418 aa6.88□□□□□ -1.31
CDC42SE2-201ENST00000360515 CACNA1HO95180 2353 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 TBKBP1A7MCY6 615 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 NOP56O00567 594 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 PER2O15055 1255 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 CYTH3O43739 400 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 SOD2P04179 222 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 CTSHP09668 335 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 GATMP50440 423 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 TROAPQ12815 778 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 LRSAM1Q6UWE0 723 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 FTSJ3Q8IY81 847 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 THNSL1Q8IYQ7 743 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 SYNPOQ8N3V7 929 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 LSM14BQ9BX40 385 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 DHX15O43143 795 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 CSRP1P21291 193 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 PLPP4Q5VZY2 271 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 MFSD6Q6ZSS7 791 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 SEC62Q99442 399 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 SCUBE2Q9NQ36 999 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 ENTPD7Q9NQZ7 604 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 GALTP07902 379 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 ZNF806P0C7X5 589 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 PPM1JQ5JR12 505 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 B3GNT9Q6UX72 402 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 BCL7CQ8WUZ0 217 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
CDC42SE2-201ENST00000360515 ADAM2Q99965 735 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms