RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 MIGA2Q7L4E1 593 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 NUP93Q8N1F7 819 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 VPS39Q96JC1 886 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 ESYT3A0FGR9 886 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 SEPT2Q15019 361 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 TTC8Q8TAM2 541 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 LAD1O00515 517 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 ENO1P06733 434 aaKnown RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 CASP1P29466 404 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 LVRNQ6Q4G3 990 aa11.93□□□□□ -0.5
COL11A1-202ENST00000358392 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-202ENST00000358392 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 NEMP1O14524 444 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ANO5Q75V66 913 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 NFKBIL1Q9UBC1 381 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PRKAB2O43741 272 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 FAM49AQ9H0Q0 323 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 NDST4Q9H3R1 872 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 CUEDC2Q9H467 287 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PCSK1NQ9UHG2 260 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 TMCC1O94876 653 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 KRT8P05787 483 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ELF1P32519 619 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 DYNC1I2Q13409 638 aaKnown RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 CCDC142Q17RM4 750 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 CYGBQ8WWM9 190 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 CYP2D7A0A087X1C5 515 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 GOLGA8RI6L899 631 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PIK3R2O00459 728 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 KRT17Q04695 432 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 AFG1LQ8WV93 481 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 SLC7A5P2Q9GIP4 190 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 LOC102724159A0A0B4J2E5 919 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 APOA1P02647 267 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 MMP1P03956 469 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 GPS1Q13098 491 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PWP2Q15269 919 aaKnown RBP11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ACCSLQ4AC99 568 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 CEP78Q5JTW2 689 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ASZ1Q8WWH4 475 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 UHRF1BP1LA0JNW5 1464 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ARIH2O95376 493 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 MYL3P08590 195 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 ICE2Q659A1 982 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
COL11A1-202ENST00000358392 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 IKBKBO14920 756 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 EFCAB14O75071 495 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ARFIP2P53365 341 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ZBED6P86452 979 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CCDC15Q0P6D6 951 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 FASTKD1Q53R41 847 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 NFRKBQ6P4R8 1299 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 TAS2R42Q7RTR8 314 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 UNC5CLQ8IV45 518 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 INPP5DQ92835 1189 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 SH3KBP1Q96B97 665 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 CHL1O00533 1208 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 RPS6P62753 249 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 KDSRQ06136 332 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ASPRV1Q53RT3 343 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PLD3Q8IV08 490 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ZNF668Q96K58 619 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 AK8Q96MA6 479 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 E2F8A0AVK6 867 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 HSPA2P54652 639 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ARMCX2Q7L311 632 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 NLRP14Q86W24 1093 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 MTBPQ96DY7 904 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PANX2Q96RD6 677 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 YIPF2Q9BWQ6 316 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 STOML1Q9UBI4 398 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ADAM21Q9UKJ8 722 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 SERPIND1P05546 499 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 OSBPP22059 807 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
COL11A1-202ENST00000358392 ALKBH5Q6P6C2 394 aaKnown RBP11.91□□□□□ -0.5
COL11A1-202ENST00000358392 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms