RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 POTECB2RU33 542 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CLIC2O15247 247 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 FAM13AO94988 1023 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 TCP10Q12799 353 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 GRB10Q13322 594 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 SEPT2Q15019 361 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CAPN12Q6ZSI9 719 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CEP128Q6ZU80 1094 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 MCUR1Q96AQ8 359 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 TRIM51Q9BSJ1 452 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.681e-6■■■■■ 74.2
RNF40-202ENST00000357890 ITGB4P16144 1822 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 TTI1O43156 1089 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 RASSF9O75901 435 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 UBOX5O94941 541 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 SERPINB2P05120 415 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 PAPOLAP51003 745 aaKnown RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 TRAF1Q13077 416 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 GRIK5Q16478 980 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 CCDC105Q8IYK2 499 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 MTMR4Q9NYA4 1195 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 SCOCQ9UIL1 159 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 LRP5O75197 1615 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 A0A087X0T9 212 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 FAM228BP0C875 321 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ACTN1P12814 892 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■□□□ 13.4
RNF40-202ENST00000357890 SCNN1DP51172 638 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 KCNJ2P63252 427 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 HS2ST1Q7LGA3 356 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 PROM2Q8N271 834 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 NEK9Q8TD19 979 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 TLR10Q9BXR5 811 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 RAB17Q9H0T7 212 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 TMBIM4Q9HC24 238 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 FGFR1OP2Q9NVK5 253 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 HDAC9Q9UKV0 1011 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ANKRD36CQ5JPF3 1778 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 TCP11X1B4DZS4 312 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 TXNDC9O14530 226 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ACSL3O95573 720 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ALDH3A1P30838 453 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 COPB2P35606 906 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 CDK17Q00537 523 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 SLMAPQ14BN4 828 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 NUDT12Q9BQG2 462 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 SSU72P8A0A1W2PR75 194 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 BAG2O95816 211 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 STAT1P42224 750 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 CUL1Q13616 776 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 RFX8Q6ZV50 586 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 YTHDF3Q7Z739 585 aaKnown RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 ZNF483Q8TF39 744 aaPredicted RBP10.78□□□□□ -0.68
RNF40-202ENST00000357890 NUDCD1Q96RS6 583 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 PACSIN1Q9BY11 444 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 DAAM1Q9Y4D1 1078 aa10.78□□□□□ -0.68
RNF40-202ENST00000357890 BAZ2AQ9UIF9 1905 aaKnown RBP10.77□□□□□ -0.68
RNF40-202ENST00000357890 CFAP73A6NFT4 308 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 CALUO43852 315 aaPredicted RBP10.77□□□□□ -0.69
RNF40-202ENST00000357890 FGGP02679 453 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 AKR1B1P15121 316 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 SLC18A3Q16572 532 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 ERICH1Q86X53 443 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 B4GALNT2Q8NHY0 566 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 CAVIN3Q969G5 261 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
RNF40-202ENST00000357890 ASIC3Q9UHC3 531 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 AMFRQ9UKV5 643 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 MYH6P13533 1939 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 CHD4Q14839 1912 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 M0R2N6 131 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.69
RNF40-202ENST00000357890 OPHN1O60890 802 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 GFPT2O94808 682 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 GJC1P36383 396 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 STAT3P40763 770 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 PDE6CP51160 858 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 ITGB3BPQ13352 177 aaPredicted RBP10.77□□□□□ -0.69
RNF40-202ENST00000357890 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
RNF40-202ENST00000357890 KLHDC7AQ5VTJ3 777 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 MYCT1Q8N699 235 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 DYDC2Q96IM9 177 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 EDEM3Q9BZQ6 932 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 DBR1Q9UK59 544 aaKnown RBP10.77□□□□□ -0.69
RNF40-202ENST00000357890 POTEFA5A3E0 1075 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 RASGRF2O14827 1237 aa10.77□□□□□ -0.69
RNF40-202ENST00000357890 TRAPPC3O43617 180 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms