RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PDE6CP51160 858 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 HYIQ5T013 277 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 BZW1Q7L1Q6 419 aaKnown RBP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 PEX26Q7Z412 305 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 TXNRD3Q86VQ6 643 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 CFAP61Q8NHU2 1237 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 ABCF2Q9UG63 623 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 ADAMTS1Q9UHI8 967 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 NAGPAQ9UK23 515 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 DAAM1Q9Y4D1 1078 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 NCANO14594 1321 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 NMT2O60551 498 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 ANP32DO95626 131 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 CHN1P15882 459 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 GYG1P46976 350 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 MFSD5Q6N075 450 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 TEX9Q8N6V9 391 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 STAMBPL1Q96FJ0 436 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 PACSIN1Q9BY11 444 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 DDX47Q9H0S4 455 aaKnown RBP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
CAPN3-205ENST00000357568 SPATS2LQ9NUQ6 558 aaKnown RBP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 PACSIN2Q9UNF0 486 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-205ENST00000357568 FLT3P36888 993 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 TECP42680 631 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 MYO1EQ12965 1108 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 LETM2Q2VYF4 491 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 C9orf131Q5VYM1 1079 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DENND2CQ68D51 928 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DPY19L2P1Q6NXN4 242 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 NT5DC3Q86UY8 548 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 NSUN4Q96CB9 384 aaKnown RBP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 CARD9Q9H257 536 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 EPB41L4BQ9H329 900 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 RASAL2Q9UJF2 1139 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 MYH4Q9Y623 1939 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 ANKRD33BA6NCL7 494 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 E7ENQ6 273 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 TRAF5O00463 557 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 H2AFZP0C0S5 128 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 PMS2P54278 862 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 COASYQ13057 564 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 ACCSLQ4AC99 568 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 CCDC38Q502W7 563 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 FAM26FQ5R3K3 315 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 H2AFVQ71UI9 128 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 TAOK1Q7L7X3 1001 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 FAM133AQ8N9E0 248 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DDX12PQ92771 950 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 ERP44Q9BS26 406 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 ROPN1BQ9BZX4 212 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 ROPN1Q9HAT0 212 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 INTS9Q9NV88 658 aaKnown RBP11.54□□□□□ -0.56
CAPN3-205ENST00000357568 SLC5A4Q9NY91 659 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 KDM3AQ9Y4C1 1321 aa11.54□□□□□ -0.56
CAPN3-205ENST00000357568 TTI1O43156 1089 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CYTH3O43739 400 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 SNX3O60493 162 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CAND2O75155 1236 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 NCALDP61601 193 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 PTK2Q05397 1052 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CALCRLQ16602 461 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 ALKBH5Q6P6C2 394 aaKnown RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 ZNF384Q8TF68 577 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 MXD3Q9BW11 206 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 KLHL33A6NCF5 533 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 NAPAP54920 295 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 KLRC3Q07444 240 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 CCDC15Q0P6D6 951 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 BNIP1Q12981 228 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 BLMHQ13867 455 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 TNIP1Q15025 636 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 DOK7Q18PE1 504 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 STRIP1Q5VSL9 837 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 ZNF483Q8TF39 744 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-205ENST00000357568 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
CAPN3-205ENST00000357568 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms