RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PPP1R37O75864 691 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 SOX5P35711 763 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 NOP2P46087 812 aaKnown RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 PADI6Q6TGC4 694 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 INPP4AQ96PE3 977 aaPredicted RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 TMEM206Q9H813 350 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 MYOZ2Q9NPC6 264 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 DBR1Q9UK59 544 aaKnown RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 RNF40O75150 1001 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 NPEPPSP55786 919 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 SLC7A5Q01650 507 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 NNTQ13423 1086 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 NBPF9Q3BBW0 867 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 GSPT2Q8IYD1 628 aaKnown RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 CLEC4DQ8WXI8 215 aa24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 ZFP91Q96JP5 570 aaPredicted RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
NKX2-1-201ENST00000354822 LMNB1P20700 586 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 COG2Q14746 738 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 PCNX4Q63HM2 1172 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 SYCE1Q8N0S2 351 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 CAVIN3Q969G5 261 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 HOOK2Q96ED9 719 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 UBIAD1Q9Y5Z9 338 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 GOLGA6BA6NDN3 693 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 PHACTR2O75167 634 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 CLSTN1O94985 981 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 RFX1P22670 979 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 CYP2J2P51589 502 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 MAPK7Q13164 816 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 SND1Q7KZF4 910 aaKnown RBP eCLIP24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 LRRC57Q8N9N7 239 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 GDAP1L1Q96MZ0 367 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 GDF3Q9NR23 364 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 TBC1D22BQ9NU19 505 aa24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 AJAP1Q9UKB5 411 aaPredicted RBP24.25■■□□□ 1.47
NKX2-1-201ENST00000354822 PHF20L1A8MW92 1017 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 F8VZ95 297 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 DHX15O43143 795 aaKnown RBP24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 EVI5O60447 810 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 EXOC3O60645 756 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 KIF4AO95239 1232 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 LYPLA2O95372 231 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 GGCXP38435 758 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 TNNC1P63316 161 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 KSR1Q8IVT5 923 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 KIAA1683Q9H0B3 1180 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 DNAJC12Q9UKB3 198 aa24.24■■□□□ 1.47
NKX2-1-201ENST00000354822 DDX3XO00571 662 aaKnown RBP eCLIP24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 TKFCQ3LXA3 575 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 ALS2CLQ60I27 953 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 GJB7Q6PEY0 223 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 DAW1Q8N136 415 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 USP38Q8NB14 1042 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 TPCN2Q8NHX9 752 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 VTI1AQ96AJ9 217 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 TIPINQ9BVW5 301 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 IKZF4Q9H2S9 585 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 FAM204AQ9H8W3 233 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 AGO4Q9HCK5 861 aaKnown RBP24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 COL20A1Q9P218 1284 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 DDX39AO00148 427 aaKnown RBP24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 KRT13P13646 458 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 QARSP47897 775 aaKnown RBP24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 BFSP1Q12934 665 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 SLFN11Q7Z7L1 901 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 SLC30A5Q8TAD4 765 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 APEX2Q9UBZ4 518 aa24.23■■□□□ 1.47
NKX2-1-201ENST00000354822 NFIBO00712 420 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 KCNK3O14649 394 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 ACTN2P35609 894 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 SNRPFP62306 86 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 TNFAIP1Q13829 316 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 DRAP1Q14919 205 aaPredicted RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 MUM1L1Q5H9M0 696 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 LEKR1Q6ZMV7 388 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 ACTRT1Q8TDG2 376 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 AFAP1L1Q8TED9 768 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 MTFR1LQ9H019 292 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 SLC38A10Q9HBR0 1119 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 TMEM59LQ9UK28 342 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 PACSIN2Q9UNF0 486 aaPredicted RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 ZHX2Q9Y6X8 837 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 K7ENM7 598 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 AGPSO00116 658 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 CAPN2P17655 700 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 HNRNPH2P55795 449 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 ZNF280AP59817 542 aaPredicted RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 CETN1Q12798 172 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 RASA3Q14644 834 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 INTS8Q75QN2 995 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 C12orf56Q8IXR9 622 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 ACCSQ96QU6 501 aa24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 INTS2Q9H0H0 1204 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-201ENST00000354822 DNA2P51530 1060 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 MYL7Q01449 175 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 PAK2Q13177 524 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 CBWD6Q4V339 395 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 CBWD3Q5JTY5 395 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 CBWD5Q5RIA9 395 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms