RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 P2RX7Q99572 595 aaKnown RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 IRF6O14896 467 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 SREBF1P36956 1147 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 VGLL4Q14135 290 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 FERMT1Q9BQL6 677 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 NACA2Q9H009 215 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 TUFT1Q9NNX1 390 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 TLR3O15455 904 aaKnown RBP13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 MYZAPP0CAP1 466 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 SLC9A1P19634 815 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 CLMNQ96JQ2 1002 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 PACSIN2Q9UNF0 486 aaPredicted RBP13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 TBX3O15119 743 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 ARPP19P56211 112 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 DRAP1Q14919 205 aaPredicted RBP13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 TMEM270Q6UE05 265 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 GLYCTKQ8IVS8 523 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 SYCE1Q8N0S2 351 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 SELENOSQ9BQE4 189 aa13.36□□□□□ -0.27
PCDHB11-201ENST00000354757 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 CAPN9O14815 690 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 PTPRAP18433 802 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 ACTR2P61160 394 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 ATRIPQ8WXE1 791 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 AFDNP55196 1824 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 VWA5AO00534 786 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 XKR3Q5GH77 459 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 TRIM50Q86XT4 487 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 MTRF1LQ9UGC7 380 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 FAM193BQ96PV7 902 aaPredicted RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 RIT2Q99578 217 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 SYT17Q9BSW7 474 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 TARS2Q9BW92 718 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 GBA2Q9HCG7 927 aaPredicted RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 AGO2Q9UKV8 859 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 EML1O00423 815 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 SERPING1P05155 500 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 CASP4P49662 377 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 SNX1Q13596 522 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 PPP1R21Q6ZMI0 780 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 KRT12Q99456 494 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
PCDHB11-201ENST00000354757 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 HERVK_113P62684 666 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 FAM167AQ96KS9 214 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 MOV10L1Q9BXT6 1211 aaKnown RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ASB14A6NK59 587 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 DGAT1O75907 488 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 RNF187Q5TA31 235 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 SLC17A8Q8NDX2 589 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 CDCA5Q96FF9 252 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ZNF541Q9H0D2 1346 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 MAPK4P31152 587 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 DYNLT1P63172 113 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 FUT2Q10981 343 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 GJB7Q6PEY0 223 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 RSPH3Q86UC2 560 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 GLIS3Q8NEA6 775 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 KBTBD4Q9NVX7 518 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
PCDHB11-201ENST00000354757 A0A1B0GTH6 734 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 ATP2A1O14983 1001 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 NCK2O43639 380 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 GUCY2DQ02846 1103 aa13.33□□□□□ -0.27
PCDHB11-201ENST00000354757 C2orf54Q08AI8 447 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms