RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 PDCD1Q15116 288 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 EZH2Q15910 746 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZC2HC1CQ53FD0 456 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PDE12Q6L8Q7 609 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 C6orf15Q6UXA7 325 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 UNC5DQ6UXZ4 953 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CYFIP1Q7L576 1253 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 REC114Q7Z4M0 266 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 HPS6Q86YV9 775 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 LPIN3Q9BQK8 851 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CCDC134Q9H6E4 229 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 C11orf49Q9H6J7 331 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SEC31BQ9NQW1 1179 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FANCD2Q9BXW9 1451 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 A0A0U1RQV1 116 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 BICDL2A1A5D9 508 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DDX39AO00148 427 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 UBOX5O94941 541 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 HOXD12P35452 270 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CDKN1AP38936 164 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CTSOP43234 321 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 GEMIN4P57678 1058 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 TMF1P82094 1093 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 C14orf28Q4W4Y0 310 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 ALFQ53S48 1182 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 RAD9BQ6WBX8 426 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 BBS12Q6ZW61 710 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DRC7Q8IY82 874 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CKAP2LQ8IYA6 745 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 FAM13CQ8NE31 585 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 DEPTORQ8TB45 409 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 KIAA1143Q96AT1 154 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SPON2Q9BUD6 331 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 PRM3Q9NNZ6 103 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 CHCHD3Q9NX63 227 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 TRAK1Q9UPV9 953 aa2.5□□□□□ -2.01
SMARCAD1-201ENST00000354268 SLC22A31A6NKX4 558 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 M0R2C6 588 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 SCAMP1O15126 338 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 IPO8O15397 1037 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HIP1RO75146 1068 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CABYRO75952 493 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CELF2O95319 508 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HEXAP06865 529 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CETPP11597 493 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 RPS12P25398 132 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 PLCD1P51178 756 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 SEPT2Q15019 361 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 SF1Q15637 639 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 USH1GQ495M9 461 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HSP90AB3PQ58FF7 597 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TNNI3KQ59H18 835 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 VWA2Q5GFL6 755 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 KAZNQ674X7 775 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 KIF6Q6ZMV9 814 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 EGFL6Q8IUX8 553 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 OR2C3Q8N628 320 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 BAHD1Q8TBE0 780 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TM9SF4Q92544 642 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 SHISA4Q96DD7 197 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HHIPQ96QV1 700 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 MCMBPQ9BTE3 642 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 NUSAP1Q9BXS6 441 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 KIAA1683Q9H0B3 1180 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 GBA2Q9HCG7 927 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 DMRT3Q9NQL9 472 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 DNAJC11Q9NVH1 559 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TRIM33Q9UPN9 1127 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 KCTD3Q9Y597 815 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 SUPT16HQ9Y5B9 1047 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 PRXQ9BXM0 1461 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 UBE2CO00762 179 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 LRP3O75074 770 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 MAP3K6O95382 1288 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CYP11A1P05108 521 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 STAG3L1P0CL83 205 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 ARAFP10398 606 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HSPA8P11142 646 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 HOXB4P17483 251 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 PTPN2P17706 415 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 L1CAMP32004 1257 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 RFC2P35250 354 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 PRKCQQ04759 706 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 STK3Q13188 491 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 NCAPHQ15003 741 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CDKL4Q5MAI5 379 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 RETSATQ6NUM9 610 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CCDC81Q6ZN84 652 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TMPRSS12Q86WS5 348 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 BCL7CQ8WUZ0 217 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 GAD1Q99259 594 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TRIM54Q9BYV2 358 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 CSRNP2Q9H175 543 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 ZMAT3Q9HA38 289 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 PIDD1Q9HB75 910 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 KLK14Q9P0G3 267 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 WHRNQ9P202 907 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 TNPO3Q9Y5L0 923 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 MYO3BQ8WXR4 1341 aa2.49□□□□□ -2.01
SMARCAD1-201ENST00000354268 ARHGAP35Q9NRY4 1499 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms