RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TACC1O75410 805 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 LCA5LO95447 670 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PRLRP16471 622 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 RPA1P27694 616 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 MATR3P43243 847 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PPP2R5CQ13362 524 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 VWA3BQ502W6 1294 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 ARHGEF16Q5VV41 709 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PIGOQ8TEQ8 1089 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 DDX12PQ92771 950 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 CCDC47Q96A33 483 aaKnown RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 DYDC2Q96IM9 177 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 FGD4Q96M96 766 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 NDST4Q9H3R1 872 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 LRRC53A6NM62 1247 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 SORBS3O60504 671 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PGK2P07205 417 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 ERCC3P19447 782 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 IRAK1P51617 712 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 SLC12A3P55017 1021 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 SP2Q02086 613 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 ITIH3Q06033 890 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PABPC4Q13310 644 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 DNAJC21Q5F1R6 531 aaKnown RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 CCDC70Q6NSX1 233 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 RIOX2Q8IUF8 465 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 RAB34Q9BZG1 259 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 PORCNQ9H237 461 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 MAP3K20Q9NYL2 800 aaKnown RBP9.42□□□□□ -0.9
TRIM55-204ENST00000353317 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 TESPA1A2RU30 521 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-204ENST00000353317 NCK2O43639 380 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 AKR1B10O60218 316 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 GAS7O60861 476 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 CCNE2O96020 404 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 PLA2G4BP0C869 781 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 BCRP11274 1271 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 CYP11B2P19099 503 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 EHHADHQ08426 723 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 MTMR1Q13613 665 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 COBLL1Q53SF7 1204 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 TEX2Q8IWB9 1127 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 CDK5RAP3Q96JB5 506 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 SH3GL2Q99962 352 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 SH2D3AQ9BRG2 576 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 MMRN2Q9H8L6 949 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 STK17AQ9UEE5 414 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 MYH11P35749 1972 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 TMEM150BA6NC51 233 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 SSBP05455 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRIM55-204ENST00000353317 PPP1R2P41236 205 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 AMPD3Q01432 767 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 SNAPC2Q13487 334 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 HAUS3Q68CZ6 603 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 TPH2Q8IWU9 490 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 TSEN2Q8NCE0 465 aaKnown RBP9.41□□□□□ -0.9
TRIM55-204ENST00000353317 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 BAP1Q92560 729 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 EFCC1Q9HA90 598 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
TRIM55-204ENST00000353317 RSPH10B2B2RC85 870 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 PDHXO00330 501 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 RSPH10BP0C881 870 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 TCP1P17987 556 aaKnown RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 GFPT1Q06210 699 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 LRRC41Q15345 812 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 UGCGQ16739 394 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 TMEM63BQ5T3F8 832 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 ANKRD35Q8N283 1001 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 CCDC155Q8N6L0 562 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 PPM1EQ8WY54 764 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 IQCDQ96DY2 449 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 INPP4AQ96PE3 977 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 TLR10Q9BXR5 811 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 RABEP2Q9H5N1 569 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 STIM2Q9P246 746 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 HTTP42858 3142 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 MAGEA1P43355 309 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 CCT5P48643 541 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 CCL15Q16663 113 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 MAN2A1Q16706 1144 aa9.4□□□□□ -0.9
TRIM55-204ENST00000353317 ASTE1Q2TB18 679 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 FASTKD5Q7L8L6 764 aaKnown RBP9.4□□□□□ -0.9
TRIM55-204ENST00000353317 SAMD3Q8N6K7 520 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms