RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 DCAF12L1Q5VU92 463 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 CYP2W1Q8TAV3 490 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 GMCL1Q96IK5 515 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 GPR88Q9GZN0 384 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 DDTLA6NHG4 134 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-202ENST00000352393 F5H6K3 240 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 TAL1P17542 331 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-202ENST00000352393 GUCY2CP25092 1073 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 KLRC3Q07444 240 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 SYDE2Q5VT97 1194 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 C6orf89Q6UWU4 347 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 SLC35G2Q8TBE7 412 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 ATP8B4Q8TF62 1192 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 CYFIP2Q96F07 1278 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 PPP1R12BO60237 982 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-202ENST00000352393 FAM13AO94988 1023 aa26.64■■□□□ 1.86
CPNE1-202ENST00000352393 FGGP02679 453 aa26.64■■□□□ 1.86
CPNE1-202ENST00000352393 PAEPP09466 180 aa26.64■■□□□ 1.86
CPNE1-202ENST00000352393 NMT1P30419 496 aaKnown RBP26.64■■□□□ 1.86
CPNE1-202ENST00000352393 ZDHHC15Q96MV8 337 aa26.64■■□□□ 1.86
CPNE1-202ENST00000352393 DIS3Q9Y2L1 958 aaKnown RBP26.64■■□□□ 1.86
CPNE1-202ENST00000352393 UTP11Q9Y3A2 253 aaKnown RBP26.64■■□□□ 1.86
CPNE1-202ENST00000352393 IGLV3-22A0A075B6J6 115 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 SFI1A8K8P3 1242 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 TRAPPC3O43617 180 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 NDUFB10O96000 172 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 PTENP60484 403 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 PPP2R2AP63151 447 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 DRAP1Q14919 205 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-202ENST00000352393 TATDN1Q6P1N9 297 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 C1orf186Q6ZWK4 172 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 HSD17B14Q9BPX1 270 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 TXLNGYQ9BZA5 131 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 PPANQ9NQ55 473 aaKnown RBP26.63■■□□□ 1.85
CPNE1-202ENST00000352393 DNAJC12Q9UKB3 198 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 PPP1R9AQ9ULJ8 1098 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 UBE4BO95155 1302 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 HOXA13P31271 388 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-202ENST00000352393 CACNB3P54284 484 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 TMEM179Q6ZVK1 233 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 TUFT1Q9NNX1 390 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 PI4KBQ9UBF8 816 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 NR2E1Q9Y466 385 aa26.63■■□□□ 1.85
CPNE1-202ENST00000352393 DHX9Q08211 1270 aaKnown RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 KCTD19Q17RG1 926 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 ZC2HC1CQ53FD0 456 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 SPDYCQ5MJ68 293 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 SH3BP5LQ7L8J4 393 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 PIGOQ8TEQ8 1089 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 FIZ1Q96SL8 496 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 TRIM51Q9BSJ1 452 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 CARD9Q9H257 536 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 DPH5Q9H2P9 285 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 CNOT8Q9UFF9 292 aaKnown RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 GMNCA6NCL1 334 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 PPFIA2O75334 1257 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 TCP10Q12799 353 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 CTTNQ14247 550 aaKnown RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 PLS1Q14651 629 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 MYCT1Q8N699 235 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 IPO4Q8TEX9 1081 aaKnown RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 CTNNBL1Q8WYA6 563 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-202ENST00000352393 FAM198AQ9UFP1 575 aa26.62■■□□□ 1.85
CPNE1-202ENST00000352393 PIK3CDO00329 1044 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 COG2Q14746 738 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 CBWD6Q4V339 395 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 CBWD3Q5JTY5 395 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 CBWD5Q5RIA9 395 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 INTS2Q9H0H0 1204 aaKnown RBP26.61■■□□□ 1.85
CPNE1-202ENST00000352393 RAB17Q9H0T7 212 aa26.61■■□□□ 1.85
CPNE1-202ENST00000352393 SWT1Q5T5J6 900 aaKnown RBP26.6■■□□□ 1.85
CPNE1-202ENST00000352393 ARHGEF26Q96DR7 871 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 GJD4Q96KN9 370 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-202ENST00000352393 CEP89Q96ST8 783 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 VCPKMTQ9H867 229 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 PARVGQ9HBI0 331 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 DMAC2Q9NW81 257 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 NOVA2Q9UNW9 492 aaKnown RBP26.6■■□□□ 1.85
CPNE1-202ENST00000352393 PCDHAC2Q9Y5I4 1007 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 ZNF646O15015 1829 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-202ENST00000352393 SMCHD1A6NHR9 2005 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 ZNF76P36508 570 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 BTNL9Q6UXG8 535 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 FMNL3Q8IVF7 1028 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 WDR18Q9BV38 432 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 IDI2Q9BXS1 227 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 BCCIPQ9P287 314 aaKnown RBP eCLIP26.6■■□□□ 1.855e-7■■■□□ 17.8
CPNE1-202ENST00000352393 DAAM1Q9Y4D1 1078 aa26.6■■□□□ 1.85
CPNE1-202ENST00000352393 SLITRK3O94933 977 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 ABCB4P21439 1286 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 TMOD1P28289 359 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 USP8P40818 1118 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 ZNF131P52739 623 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 ACTN3Q08043 901 aaPredicted RBP26.59■■□□□ 1.85
CPNE1-202ENST00000352393 IFT88Q13099 833 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 IKQ13123 557 aaPredicted RBP26.59■■□□□ 1.85
CPNE1-202ENST00000352393 PLCB4Q15147 1175 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 PPP2R5EQ16537 467 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 OTOP1Q7RTM1 612 aa26.59■■□□□ 1.85
CPNE1-202ENST00000352393 DYDC2Q96IM9 177 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms