RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 TAF11Q15544 211 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 CNGA2Q16280 664 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 C16orf86Q6ZW13 317 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 CFAP61Q8NHU2 1237 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 HES6Q96HZ4 224 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 RXFP1Q9HBX9 757 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 C6orf50Q9HD87 102 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 GPR75-ASB3A0A0A6YYF3 556 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 USP17L3A6NCW0 530 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 MYMKA6NI61 221 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 CYTH3O43739 400 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 ITGA4P13612 1032 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 CCNB1P14635 433 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 GNA11P29992 359 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 RFC4P35249 363 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 CCDC15Q0P6D6 951 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 USP17L1Q7RTZ2 530 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 PEX26Q7Z412 305 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 TGFBRAP1Q8WUH2 860 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 HPS3Q969F9 1004 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 NAP1L3Q99457 506 aaPredicted RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 TSC22D3Q99576 134 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 ERP44Q9BS26 406 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 TRIM7Q9C029 511 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 AZI2Q9H6S1 392 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 ARL2BPQ9Y2Y0 163 aa16.18■□□□□ 0.18
TRAF3-202ENST00000351691 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
TRAF3-202ENST00000351691 RTN3O95197 1032 aaPredicted RBP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 SHBGP04278 402 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 GNAZP19086 355 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 PPARDQ03181 441 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 KLRC3Q07444 240 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 DHX34Q14147 1143 aaKnown RBP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 PLS1Q14651 629 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 MFSD5Q6N075 450 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 TRIM59Q8IWR1 403 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 LMNTD2Q8IXW0 634 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 SPICE1Q8N0Z3 855 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 KLRF2D3W0D1 207 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 EVI5O60447 810 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 AP1G2O75843 785 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 IL1R1P14778 569 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 CNGA1P29973 690 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 PRKCIP41743 596 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 NOVP48745 357 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 DIXDC1Q155Q3 683 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 PARP6Q2NL67 630 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 THEMIS2Q5TEJ8 643 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 NT5DC3Q86UY8 548 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 GPIHBP1Q8IV16 184 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 PRCCQ92733 491 aaPredicted RBP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 RNF25Q96BH1 459 aaPredicted RBP16.17■□□□□ 0.18
TRAF3-202ENST00000351691 DPH5Q9H2P9 285 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 JAG2Q9Y219 1238 aa16.17■□□□□ 0.18
TRAF3-202ENST00000351691 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 LRRD1A4D1F6 860 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 HIP1RO75146 1068 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 ADRA2BP18089 450 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 CDK8P49336 464 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 GALNT15Q8N3T1 639 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 SH3TC2Q8TF17 1288 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 ROPN1BQ9BZX4 212 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 ROPN1Q9HAT0 212 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 PAPOLBQ9NRJ5 636 aaKnown RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 RGS17Q9UGC6 210 aaPredicted RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 PRKAG3Q9UGI9 489 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 NAGPAQ9UK23 515 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
TRAF3-202ENST00000351691 SNED1Q8TER0 1413 aa16.16■□□□□ 0.18
TRAF3-202ENST00000351691 ATP5HO75947 161 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 GRB10Q13322 594 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 NFIXQ14938 502 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 ZC3H3Q8IXZ2 948 aaKnown RBP16.15■□□□□ 0.18
TRAF3-202ENST00000351691 MYOCDQ8IZQ8 938 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 EYA3Q99504 573 aa16.15■□□□□ 0.18
TRAF3-202ENST00000351691 PARP2Q9UGN5 583 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms