RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 IWS1Q96ST2 819 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 EPC1Q9H2F5 836 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 IKZF4Q9H2S9 585 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 SIX2Q9NPC8 291 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 FAM53CQ9NYF3 392 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 DAAM1Q9Y4D1 1078 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
SAMM50-201ENST00000350028 ZRANB2O95218 330 aaKnown RBP eCLIP18.25■□□□□ 0.51
SAMM50-201ENST00000350028 PRLRP16471 622 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 PRKCIP41743 596 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 CYP2J2P51589 502 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 UGCGQ16739 394 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 MLXIPQ9HAP2 919 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 RNF181Q9P0P0 153 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 PCDHA10Q9Y5I2 948 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 FHOD1Q9Y613 1164 aa18.25■□□□□ 0.51
SAMM50-201ENST00000350028 NFASCO94856 1347 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 EXOC3O60645 756 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 MOCS3O95396 460 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 FMO5P49326 533 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 CBX1P83916 185 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 XKR9Q5GH70 373 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 SMAP1Q8IYB5 467 aaPredicted RBP18.24■□□□□ 0.51
SAMM50-201ENST00000350028 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
SAMM50-201ENST00000350028 CCDC151A5D8V7 595 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 SPDYE16A6NNV3 312 aaPredicted RBP18.23■□□□□ 0.51
SAMM50-201ENST00000350028 BACH1O14867 736 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 GTF2BQ00403 316 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 ARID5AQ03989 594 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 OTUD6AQ7L8S5 288 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.23■□□□□ 0.51
SAMM50-201ENST00000350028 ANKZF1Q9H8Y5 726 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 RAB21Q9UL25 225 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 CAPN6Q9Y6Q1 641 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 KRT13P13646 458 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 NCKAP1LP55160 1127 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 JAM2P57087 298 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 PLS1Q14651 629 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 CC2D1AQ6P1N0 951 aaPredicted RBP18.23■□□□□ 0.51
SAMM50-201ENST00000350028 HAUS6Q7Z4H7 955 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 ATP6V0A1Q93050 837 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 ARFGAP3Q9NP61 516 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
SAMM50-201ENST00000350028 SNX12Q9UMY4 172 aa18.23■□□□□ 0.51
SAMM50-201ENST00000350028 A0A087X0T9 212 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 TFRCP02786 760 aaKnown RBP18.22■□□□□ 0.51
SAMM50-201ENST00000350028 PSAPP07602 524 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 FAM228BP0C875 321 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 KCNA2P16389 499 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 FERP16591 822 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 STAT1P42224 750 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 BFSP1Q12934 665 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 NAB2Q15742 525 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 GNPTABQ3T906 1256 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 FMNL3Q8IVF7 1028 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 KRT222Q8N1A0 295 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 HVCN1Q96D96 273 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 ADAMTS1Q9UHI8 967 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 SNCAIPQ9Y6H5 919 aa18.22■□□□□ 0.51
SAMM50-201ENST00000350028 ATP8B3O60423 1300 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 BTNL10A8MVZ5 291 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 MAPK13O15264 365 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 SRGAP2O75044 1071 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 TCP1P17987 556 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 PTK2Q05397 1052 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 UTP14CQ5TAP6 766 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 HNRNPLLQ8WVV9 542 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 MMS19Q96T76 1030 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 ADARB2Q9NS39 739 aaKnown RBP18.21■□□□□ 0.51
SAMM50-201ENST00000350028 TSKSQ9UJT2 592 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 EXOC7Q9UPT5 735 aa18.21■□□□□ 0.51
SAMM50-201ENST00000350028 SPATA31C2B4DYI2 1134 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 RGS20O76081 388 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 GFPT2O94808 682 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 PNMA6AP0CW24 399 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 SMTNP53814 917 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 NPEPPSP55786 919 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 PEX3P56589 373 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 PRKG1Q13976 671 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-201ENST00000350028 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 ANKRD13CQ8N6S4 541 aa18.2■□□□□ 0.5
SAMM50-201ENST00000350028 STK33Q9BYT3 514 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms