RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SUGCTQ9HAC7 445 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 EXOC1Q9NV70 894 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 NRCAMQ92823 1304 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 RRN3P2A6NIE6 340 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 KBTBD13C9JR72 458 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 DNM1LO00429 736 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 TREHO43280 583 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 NLRP12P59046 1061 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 ZNF445P59923 1031 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 STK4Q13043 487 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 HERC4Q5GLZ8 1057 aaPredicted RBP21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 GDF6Q6KF10 455 aaPredicted RBP21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 EFCAB12Q6NXP0 572 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 SASS6Q6UVJ0 657 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 C7orf31Q8N865 590 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 KIAA0895Q8NCT3 520 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 FIZ1Q96SL8 496 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 TIPINQ9BVW5 301 aa21.04■□□□□ 0.96
CHMP4A-201ENST00000347519 C17orf102A2RUQ5 167 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 MBLAC1A4D2B0 266 aaPredicted RBP21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 CABYRO75952 493 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 TFRCP02786 760 aaKnown RBP21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 ITGA7Q13683 1181 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 DPCR1Q3MIW9 517 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 NFRKBQ6P4R8 1299 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 MYCT1Q8N699 235 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 VTI1AQ96AJ9 217 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 PARVGQ9HBI0 331 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 SLC39A2Q9NP94 309 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 RMND1Q9NWS8 449 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 GTF2IRD1Q9UHL9 959 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 COL4A3BPQ9Y5P4 624 aa21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 TNRC18O15417 2968 aaPredicted RBP21.03■□□□□ 0.96
CHMP4A-201ENST00000347519 RBAK-RBAKDNI3L0D1 243 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 MAGEB2O15479 319 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 CD44P16070 742 aaKnown RBP21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 GLRA2P23416 452 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 NMT1P30419 496 aaKnown RBP21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 CASP5P51878 434 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 FAM47CQ5HY64 1035 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 FAM26FQ5R3K3 315 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 ZNF658Q5TYW1 1059 aaPredicted RBP21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 KSR1Q8IVT5 923 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 METTL13Q8N6R0 699 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 TRIML1Q8N9V2 468 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 DRC1Q96MC2 740 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 GLT1D1Q96MS3 346 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 CTAGE1Q96RT6 745 aa21.02■□□□□ 0.96
CHMP4A-201ENST00000347519 PLS3P13797 630 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 GAP43P17677 238 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 GJA8P48165 433 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 PEX3P56589 373 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 IER5Q5VY09 327 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 LRSAM1Q6UWE0 723 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 C11orf57Q6ZUT1 292 aaPredicted RBP21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 PRPF31Q8WWY3 499 aaKnown RBP21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 KIFAP3Q92845 792 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 KIFC3Q9BVG8 833 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 SUCLA2Q9P2R7 463 aaPredicted RBP21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 MAPK8IP1Q9UQF2 711 aa21.01■□□□□ 0.95
CHMP4A-201ENST00000347519 ADGRA3Q8IWK6 1321 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 MYBP10242 640 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 CYP2C9P11712 490 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 STX1AQ16623 288 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 ODR4Q5SWX8 454 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 KIAA0319LQ8IZA0 1049 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 SLC43A3Q8NBI5 491 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 DIS3LQ8TF46 1054 aaKnown RBP21■□□□□ 0.95
CHMP4A-201ENST00000347519 CCDC47Q96A33 483 aaKnown RBP21■□□□□ 0.95
CHMP4A-201ENST00000347519 ZNF668Q96K58 619 aaPredicted RBP21■□□□□ 0.95
CHMP4A-201ENST00000347519 JPH2Q9BR39 696 aaPredicted RBP21■□□□□ 0.95
CHMP4A-201ENST00000347519 STARD7Q9NQZ5 370 aa21■□□□□ 0.95
CHMP4A-201ENST00000347519 PPP1R3GB7ZBB8 358 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 GAS2O43903 313 aaKnown RBP20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 CCDC192P0DO97 292 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 NPTX2P47972 431 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 RTP1P59025 263 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 PSMD2Q13200 908 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 CAPSQ13938 189 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 EXOC8Q8IYI6 725 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 RETREG2Q8NC44 543 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 TCP11Q8WWU5 503 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 WNT8BQ93098 351 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 FAM49AQ9H0Q0 323 aaPredicted RBP20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 DNAJC25Q9H1X3 360 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 OLFML3Q9NRN5 406 aa20.99■□□□□ 0.95
CHMP4A-201ENST00000347519 SLC16A4O15374 487 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 VTNP04004 478 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 PRCPP42785 496 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 LAMTOR4Q0VGL1 99 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 ANO6Q4KMQ2 910 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 ZC2HC1CQ53FD0 456 aaPredicted RBP20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 EPM2AIP1Q7L775 607 aaPredicted RBP20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 GAS2L3Q86XJ1 694 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 FAM178BQ8IXR5 827 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 PSPC1Q8WXF1 523 aaKnown RBP20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 PPP1R16BQ96T49 567 aa20.98■□□□□ 0.95
CHMP4A-201ENST00000347519 MRPL44Q9H9J2 332 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms