RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.19■□□□□ 0.18
HMGN3-202ENST00000344726 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 C9IYK1 514 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 TNFRSF10AO00220 468 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 QARSP47897 775 aaKnown RBP16.19■□□□□ 0.18
HMGN3-202ENST00000344726 GPC3P51654 580 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 DSC3Q14574 896 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
HMGN3-202ENST00000344726 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
HMGN3-202ENST00000344726 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 ADAM2Q99965 735 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 RGS18Q9NS28 235 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 RGL1Q9NZL6 768 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 HCSTQ9UBK5 93 aa16.19■□□□□ 0.18
HMGN3-202ENST00000344726 MARCH6O60337 910 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 P4HBP07237 508 aaKnown RBP16.18■□□□□ 0.18
HMGN3-202ENST00000344726 DNAJB1P25685 340 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 TMOD1P28289 359 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
HMGN3-202ENST00000344726 NPEPPSP55786 919 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 HMGN5P82970 282 aaKnown RBP16.18■□□□□ 0.18
HMGN3-202ENST00000344726 CAMK1Q14012 370 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 EPHA7Q15375 998 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 CALCRLQ16602 461 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 TCEAL5Q5H9L2 206 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 SLFN12Q8IYM2 578 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 FBXO18Q8NFZ0 1043 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 DYDC2Q96IM9 177 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 LXNQ9BS40 222 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 TMEM60Q9H2L4 133 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
HMGN3-202ENST00000344726 PLXNA4Q9HCM2 1894 aa16.18■□□□□ 0.18
HMGN3-202ENST00000344726 ZBTB39O15060 712 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 GPR182O15218 404 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 NEMFO60524 1076 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 MAFO75444 373 aaPredicted RBP16.17■□□□□ 0.18
HMGN3-202ENST00000344726 CSPG5O95196 566 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
HMGN3-202ENST00000344726 ATP2B1P20020 1258 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 FGFR4P22455 802 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 CYP4A11Q02928 519 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 CTTNQ14247 550 aaKnown RBP16.17■□□□□ 0.18
HMGN3-202ENST00000344726 SAFBQ15424 915 aaKnown RBP eCLIP16.17■□□□□ 0.18
HMGN3-202ENST00000344726 PTPROQ16827 1216 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 TBC1D32Q96NH3 1257 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 ALG13Q9NP73 1137 aaKnown RBP16.17■□□□□ 0.18
HMGN3-202ENST00000344726 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
HMGN3-202ENST00000344726 DENND3A2RUS2 1198 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 ITGB1P05556 798 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 RB1P06400 928 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 STAG3L1P0CL83 205 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 FGFR1P11362 822 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 EIF4BP23588 611 aaKnown RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 TXKP42681 527 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 FAM189BP81408 668 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 COL19A1Q14993 1142 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 AAK1Q2M2I8 961 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 SLC24A5Q71RS6 500 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 FAM184AQ8NB25 1140 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 EIF2AK1Q9BQI3 630 aaKnown RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 C11orf84Q9BUA3 381 aaPredicted RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 FOXP1Q9H334 677 aaPredicted RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 NSUN3Q9H649 340 aaKnown RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 TTC12Q9H892 705 aaPredicted RBP16.16■□□□□ 0.18
HMGN3-202ENST00000344726 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 RWDD3Q9Y3V2 267 aa16.16■□□□□ 0.18
HMGN3-202ENST00000344726 C5orf42Q9H799 3197 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 ST18O60284 1047 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 SLITRK3O94933 977 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 DARSP14868 501 aaKnown RBP16.15■□□□□ 0.18
HMGN3-202ENST00000344726 KCNA5P22460 613 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
HMGN3-202ENST00000344726 MCM7P33993 719 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 KSR1Q8IVT5 923 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 IL27Q8NEV9 243 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.15■□□□□ 0.18
HMGN3-202ENST00000344726 NLRP7Q8WX94 980 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 HSD17B14Q9BPX1 270 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 C1orf112Q9NSG2 853 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 SUCLA2Q9P2R7 463 aaPredicted RBP16.15■□□□□ 0.18
HMGN3-202ENST00000344726 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 PCDHB7Q9Y5E2 793 aa16.15■□□□□ 0.18
HMGN3-202ENST00000344726 A0A087WZ62 844 aa16.14■□□□□ 0.17
HMGN3-202ENST00000344726 POTEMA6NI47 508 aa16.14■□□□□ 0.17
HMGN3-202ENST00000344726 TBKBP1A7MCY6 615 aa16.14■□□□□ 0.17
HMGN3-202ENST00000344726 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGN3-202ENST00000344726 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGN3-202ENST00000344726 IRS1P35568 1242 aa16.14■□□□□ 0.17
HMGN3-202ENST00000344726 NBR1Q14596 966 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms