RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GCOM2Q9BZD3 368 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-201ENST00000344376 RGS18Q9NS28 235 aa17.98■□□□□ 0.47
ATG4B-201ENST00000344376 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-201ENST00000344376 PCDHB7Q9Y5E2 793 aa17.98■□□□□ 0.47
ATG4B-201ENST00000344376 WDR81Q562E7 1941 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 WNT7AO00755 349 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 ZSCAN20P17040 1043 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-201ENST00000344376 CTNNB1P35222 781 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 NPEPPSP55786 919 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 ZNF410Q86VK4 478 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 ZNF668Q96K58 619 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-201ENST00000344376 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
ATG4B-201ENST00000344376 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-201ENST00000344376 COL4A4P53420 1690 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-201ENST00000344376 EVPLQ92817 2033 aa17.97■□□□□ 0.47
ATG4B-201ENST00000344376 GAS2O43903 313 aaKnown RBP17.96■□□□□ 0.47
ATG4B-201ENST00000344376 MGEA5O60502 916 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 DRP2Q13474 957 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 XKR9Q5GH70 373 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 TTC38Q5R3I4 469 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 RHPN2Q8IUC4 686 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 INO80BQ9C086 356 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-201ENST00000344376 EYSQ5T1H1 3165 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 TTC3P53804 2025 aa17.96■□□□□ 0.47
ATG4B-201ENST00000344376 H3BNC9 293 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 SLITRK3O94933 977 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 LYPLA2O95372 231 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 RB1P06400 928 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 OR52Z1P0C646 297 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.46
ATG4B-201ENST00000344376 GPM6BQ13491 265 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 ZNF174Q15697 407 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 CRIPAKQ8N1N5 446 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.46
ATG4B-201ENST00000344376 TCP11Q8WWU5 503 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.46
ATG4B-201ENST00000344376 TMEM60Q9H2L4 133 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 DHX33Q9H6R0 707 aaKnown RBP17.96■□□□□ 0.46
ATG4B-201ENST00000344376 PRDM6Q9NQX0 595 aa17.96■□□□□ 0.46
ATG4B-201ENST00000344376 TRANK1O15050 2925 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 C9IYK1 514 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 BMPR1AP36894 532 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 DSC3Q14574 896 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 EMC2Q15006 297 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 PAN2Q504Q3 1202 aaKnown RBP17.95■□□□□ 0.46
ATG4B-201ENST00000344376 ERMNQ8TAM6 284 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 PSPC1Q8WXF1 523 aaKnown RBP17.95■□□□□ 0.46
ATG4B-201ENST00000344376 CLP1Q92989 425 aaKnown RBP17.95■□□□□ 0.46
ATG4B-201ENST00000344376 NLRP4Q96MN2 994 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 HSD17B14Q9BPX1 270 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 ELAC1Q9H777 363 aaKnown RBP17.95■□□□□ 0.46
ATG4B-201ENST00000344376 ATP6V0A4Q9HBG4 840 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 TMEM161AQ9NX61 479 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 COL4A3BPQ9Y5P4 624 aa17.95■□□□□ 0.46
ATG4B-201ENST00000344376 A0A087WZ62 844 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 POTEMA6NI47 508 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 DLL1O00548 723 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
ATG4B-201ENST00000344376 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.468e-10■■□□□ 12.2
ATG4B-201ENST00000344376 MRPL38Q96DV4 380 aaKnown RBP17.94■□□□□ 0.46
ATG4B-201ENST00000344376 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-201ENST00000344376 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 ANKEF1Q9NU02 776 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 DACT1Q9NYF0 836 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-201ENST00000344376 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
ATG4B-201ENST00000344376 C5orf67F2Z3F1 127 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 H3BQV1 296 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 HOXA2O43364 376 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 MRPS5P82675 430 aaKnown RBP17.93■□□□□ 0.46
ATG4B-201ENST00000344376 AAK1Q2M2I8 961 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 TIGD5Q53EQ6 642 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 MCTP1Q6DN14 999 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
ATG4B-201ENST00000344376 SYMPKQ92797 1274 aaKnown RBP17.93■□□□□ 0.46
ATG4B-201ENST00000344376 MTRQ99707 1265 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-201ENST00000344376 COG5Q9UP83 839 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 SMC3Q9UQE7 1217 aa17.93■□□□□ 0.46
ATG4B-201ENST00000344376 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
ATG4B-201ENST00000344376 FGFR4P22455 802 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 GJB2P29033 226 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 TECP42680 631 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 FAM189BP81408 668 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 TMEM143Q96AN5 459 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 LMAN2LQ9H0V9 348 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 TUFT1Q9NNX1 390 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 CHST12Q9NRB3 414 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 UNC80Q8N2C7 3258 aa17.92■□□□□ 0.46
ATG4B-201ENST00000344376 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 ASAP2O43150 1006 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 DGAT1O75907 488 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 GATMP50440 423 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
ATG4B-201ENST00000344376 CATSPER4Q7RTX7 472 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 KSR1Q8IVT5 923 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 ABI1Q8IZP0 508 aa17.91■□□□□ 0.46
ATG4B-201ENST00000344376 PRPF31Q8WWY3 499 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms