RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GRID2IPA4D2P6 1211 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 RAPGEF3O95398 923 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CIITAP33076 1130 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ECT2LQ008S8 904 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC103Q8IW40 242 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 HOXC10Q9NYD6 342 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 M0QX08 132 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ANP32DO95626 131 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ACAT1P24752 427 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TMOD1P28289 359 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SSTP61278 116 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 C5orf22Q49AR2 442 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SEL1L2Q5TEA6 688 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PATL1Q86TB9 770 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 GALNT11Q8NCW6 608 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CCT8L2Q96SF2 557 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ZCWPW1Q9H0M4 648 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 KIAA1468Q9P260 1216 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DBF4Q9UBU7 674 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 INTUQ9ULD6 942 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 GOLGA8JA6NMD2 632 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 UFL1O94874 794 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 AKAP5P24588 427 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TNFAIP2Q03169 654 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 OSBP2Q969R2 916 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 POLR2DO15514 142 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 IL12AP29459 219 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 VPS72Q15906 364 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TRAF4Q9BUZ4 470 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MAPKBP1O60336 1514 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NOS1APO75052 506 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MRPS9P82933 396 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 EFR3AQ14156 821 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 AGMOQ6ZNB7 445 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 GALNT6Q8NCL4 622 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 APOL5Q9BWW9 433 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SERHL2Q9H4I8 314 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MLXIPLQ9NP71 852 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ATP9BO43861 1147 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PTGS1P23219 599 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ETV3P41162 512 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DDB1Q16531 1140 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ABRAXAS1Q6UWZ7 409 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SFR1Q86XK3 245 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ANKRD53Q8N9V6 530 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 OSBPL10Q9BXB5 764 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NVLO15381 856 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PABPC1P11940 636 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 BTBD9Q96Q07 612 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 YME1L1Q96TA2 773 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SYNCRIPO60506 623 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SLC12A1Q13621 1099 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TP53BP2Q13625 1128 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NEPROQ6NW34 567 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SAGE2PA6NJ88 616 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NDUFS2O75306 463 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TGFBR2P37173 567 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM25Q14258 630 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TBC1D9BQ66K14 1250 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 HIBCHQ6NVY1 386 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 UBLCP1Q8WVY7 318 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 APPL1Q9UKG1 709 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SPDYE3A6NKU9 549 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DKC1O60832 514 aaKnown RBP eCLIP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CABP4P57796 275 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 HSPA14Q0VDF9 509 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PKD2Q13563 968 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TLDC1Q6P9B6 456 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TBC1D1Q86TI0 1168 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 VMP1Q96GC9 406 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 KLHL1Q9NR64 748 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 HBS1LQ9Y450 684 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 A0A1B0GVL5 298 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 SNTNA6NMZ2 147 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ARHGEF33A8MVX0 844 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 KRT79Q5XKE5 535 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 USP51Q70EK9 711 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 USP48Q86UV5 1035 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 FRS2Q8WU20 508 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DNAJC9Q8WXX5 260 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 APBB2Q92870 758 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ARL5BQ96KC2 179 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MTMR9Q96QG7 549 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CARD6Q9BX69 1037 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ZFYVE1Q9HBF4 777 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 GYG2O15488 501 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 GRIK1P39086 918 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 KRT39Q6A163 491 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 BTNL9Q6UXG8 535 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 KCNB2Q92953 911 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 MAGED4Q96JG8 741 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 TEX51A0A1B0GUA7 166 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 TRAFD1O14545 582 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 C1orf146Q5VVC0 180 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 COLGALT2Q8IYK4 626 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 OMA1Q96E52 524 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 WDR97A6NE52 1622 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms