RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MAPK8IP1Q9UQF2 711 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 USP15Q9Y4E8 981 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 BRWD1Q9NSI6 2320 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ARPC4-TTLL3A0A0A6YYG9 625 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 GRID2IPA4D2P6 1211 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PAX7P23759 505 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PTK2BQ14289 1009 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ATP2B3Q16720 1220 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CDC37L1Q7L3B6 337 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SLC17A8Q8NDX2 589 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PYROXD1Q8WU10 500 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SNF8Q96H20 258 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ZNF644Q9H582 1327 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 AKR1D1P51857 326 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ADARP55265 1226 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 PTPN12Q05209 780 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 ENKURQ8TC29 256 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SMCR8Q8TEV9 937 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 FANCMQ8IYD8 2048 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 FREM3P0C091 2139 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SAC3D1A6NKF1 404 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 KLHL18O94889 574 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 MYBL1P10243 752 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ZNF18P17022 549 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PSMC3P17980 439 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 MECOMQ03112 1051 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 NCF4Q15080 339 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TMEM63BQ5T3F8 832 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 TSHZ1Q6ZSZ6 1077 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 DBF4Q9UBU7 674 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 NOVA2Q9UNW9 492 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 SLC4A4Q9Y6R1 1079 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 ENC1O14682 589 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 SEMA3DO95025 777 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PRLP01236 227 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 LSP1P33241 339 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 CDC37Q16543 378 aaPredicted RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 PPP4R3CPQ6ZMV5 832 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 RMDN1Q96DB5 314 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 PRMT1Q99873 361 aaKnown RBP6.56□□□□□ -1.36
VCAN-203ENST00000343200 KCNG1Q9UIX4 513 aa6.56□□□□□ -1.36
VCAN-203ENST00000343200 COPEO14579 308 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 IDH3BO43837 385 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 SEC24DO94855 1032 aaPredicted RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 ZBED1O96006 694 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 SLC7A5Q01650 507 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 ATP1A4Q13733 1029 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 KRT72Q14CN4 511 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PPP2R5BQ15173 497 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 RABGAP1LQ5R372 815 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 WDR36Q8NI36 951 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 RASSF5Q8WWW0 418 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TUFT1Q9NNX1 390 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 ARHGEF12Q9NZN5 1544 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PRR14LQ5THK1 2151 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 WDR91A4D1P6 747 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 FAM83GA6ND36 823 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 COG2Q14746 738 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 SCG3Q8WXD2 468 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 GCNT4Q9P109 453 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 SEL1LQ9UBV2 794 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 RNF103O00237 685 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 ANGPT2O15123 496 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 COPS2P61201 443 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TAS2R42Q7RTR8 314 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 CCDC127Q96BQ5 260 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 VCPKMTQ9H867 229 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 DCTN4Q9UJW0 460 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TTC21BQ7Z4L5 1316 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 A0A1W2PRG6 482 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 F8W8V4 182 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 CCDC188H7C350 402 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PLCG2P16885 1265 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 CXCR5P32302 372 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 RGS21Q2M5E4 152 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 LONP2Q86WA8 852 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 KIRREL3Q8IZU9 778 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 OR8H2Q8N162 312 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 GORASP1Q9BQQ3 440 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TUBGCP2Q9BSJ2 902 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 NOD2Q9HC29 1040 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 CEP152O94986 1710 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 KPNA7A9QM74 516 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 LPXNO60711 386 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 PSMA3P25788 255 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 HNRNPH1P31943 449 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 COPB2P35606 906 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 TRAP1Q12931 704 aaKnown RBP6.55□□□□□ -1.36
VCAN-203ENST00000343200 ACAP2Q15057 778 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 IYDQ6PHW0 289 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 APPL2Q8NEU8 664 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 MAGED4Q96JG8 741 aa6.55□□□□□ -1.36
VCAN-203ENST00000343200 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms