RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SOCS7O14512 581 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 APBA1Q02410 837 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 WDR78Q5VTH9 848 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 TCERG1LQ5VWI1 586 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 EEPD1Q7L9B9 569 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 SLC9A9Q8IVB4 645 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 SLC35C1Q96A29 364 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 ZNF302Q9NR11 478 aa21.92■■□□□ 1.1
RTN1-202ENST00000342503 DYNC1I1O14576 645 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 ATP4AP20648 1035 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 CYLC1P35663 651 aaPredicted RBP21.91■■□□□ 1.1
RTN1-202ENST00000342503 SOX10P56693 466 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 XKR3Q5GH77 459 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 CCDC170Q8IYT3 715 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 SLC17A8Q8NDX2 589 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 WDR24Q96S15 920 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 MPHOSPH6Q99547 160 aaKnown RBP21.91■■□□□ 1.1
RTN1-202ENST00000342503 NLRC4Q9NPP4 1024 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 PDLIM7Q9NR12 457 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 CYP26B1Q9NR63 512 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 FRMD4BQ9Y2L6 1034 aa21.91■■□□□ 1.1
RTN1-202ENST00000342503 MAFBQ9Y5Q3 323 aaPredicted RBP21.91■■□□□ 1.1
RTN1-202ENST00000342503 FARP2O94887 1054 aaPredicted RBP21.9■■□□□ 1.1
RTN1-202ENST00000342503 ARHGAP25P42331 645 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 MKRN3Q13064 507 aaKnown RBP21.9■■□□□ 1.1
RTN1-202ENST00000342503 MYBPC2Q14324 1141 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 SHCBP1Q8NEM2 672 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 BSNDQ8WZ55 320 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 KIFAP3Q92845 792 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 IRX2Q9BZI1 471 aaPredicted RBP21.9■■□□□ 1.1
RTN1-202ENST00000342503 GANQ9H2C0 597 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 MCM3APO60318 1980 aa21.9■■□□□ 1.1
RTN1-202ENST00000342503 GSTTP1A0A1W2PQM5 241 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 CCDC169A6NNP5 214 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 DGAT1O75907 488 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 PLEKP08567 350 aaPredicted RBP21.89■■□□□ 1.1
RTN1-202ENST00000342503 CETPP11597 493 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 CASQ1P31415 396 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 NPTX2P47972 431 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 POLR2FP61218 127 aaKnown RBP21.89■■□□□ 1.1
RTN1-202ENST00000342503 NEDD9Q14511 834 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 MTERF2Q49AM1 385 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 ARHGAP29Q52LW3 1261 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 DPY19L2P1Q6NXN4 242 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 GTF3C2Q8WUA4 911 aaPredicted RBP21.89■■□□□ 1.1
RTN1-202ENST00000342503 MS4A4AQ96JQ5 239 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 GBA2Q9HCG7 927 aaPredicted RBP21.89■■□□□ 1.1
RTN1-202ENST00000342503 ARHGAP20Q9P2F6 1191 aa21.89■■□□□ 1.1
RTN1-202ENST00000342503 IGKV6D-21A0A0A0MT36 114 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 EIF3CLB5ME19 914 aaKnown RBP21.89■■□□□ 1.09
RTN1-202ENST00000342503 TISP43B9A030 160 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 PDHXO00330 501 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 EXOC3O60645 756 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 ABL1P00519 1130 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 TGFB3P10600 412 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 SLC9A1P19634 815 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 GTF2A2P52657 109 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 SMTNP53814 917 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 DMP1Q13316 513 aaPredicted RBP21.89■■□□□ 1.09
RTN1-202ENST00000342503 MCPH1Q8NEM0 835 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 TSC1Q92574 1164 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 EIF3CQ99613 913 aaKnown RBP21.89■■□□□ 1.09
RTN1-202ENST00000342503 PORCNQ9H237 461 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 PCIF1Q9H4Z3 704 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 ATP6V0A4Q9HBG4 840 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 XPNPEP1Q9NQW7 623 aa21.89■■□□□ 1.09
RTN1-202ENST00000342503 CGNQ9P2M7 1197 aaKnown RBP21.89■■□□□ 1.09
RTN1-202ENST00000342503 PLXNB2O15031 1838 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 BTBD19C9JJ37 291 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 CTIFO43310 598 aaKnown RBP21.88■■□□□ 1.09
RTN1-202ENST00000342503 GGPS1O95749 300 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 OATP04181 439 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 ACTN1P12814 892 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 FKBP1BP68106 108 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 KRT83P78385 493 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 CCL15Q16663 113 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 EXOC3L4Q17RC7 722 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 LY6KQ17RY6 165 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 GPIHBP1Q8IV16 184 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 C12orf56Q8IXR9 622 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 TMEM161BQ8NDZ6 487 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 SPIRE2Q8WWL2 714 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 CCDC42Q96M95 316 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 KIFC3Q9BVG8 833 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 L2HGDHQ9H9P8 463 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 EFCC1Q9HA90 598 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 C17orf75Q9HAS0 396 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 PLCB1Q9NQ66 1216 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 KMT5AQ9NQR1 393 aa21.88■■□□□ 1.09
RTN1-202ENST00000342503 PLXNA1Q9UIW2 1896 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 KIF5CO60282 957 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 ARIH2O95376 493 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 PON1P27169 355 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 GBP6Q6ZN66 633 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 GPRC5AQ8NFJ5 357 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 TMEM174Q8WUU8 243 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 PCYT2Q99447 389 aa21.87■■□□□ 1.09
RTN1-202ENST00000342503 NUCKS1Q9H1E3 243 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms