RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GCOM2Q9BZD3 368 aaPredicted RBP22.6■■□□□ 1.21
SYNE2-201ENST00000341472 CYP26B1Q9NR63 512 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.59■■□□□ 1.21
SYNE2-201ENST00000341472 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 NAALADL2Q58DX5 795 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 FAM102BQ5T8I3 360 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 NCAPH2Q6IBW4 605 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 EXOC8Q8IYI6 725 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 CEP170P1Q96L14 293 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 NSUN3Q9H649 340 aaKnown RBP22.59■■□□□ 1.21
SYNE2-201ENST00000341472 ELAC1Q9H777 363 aaKnown RBP22.59■■□□□ 1.21
SYNE2-201ENST00000341472 TMEM161AQ9NX61 479 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 RGL1Q9NZL6 768 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 PCDHA12Q9UN75 941 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 PLAGL2Q9UPG8 496 aa22.59■■□□□ 1.21
SYNE2-201ENST00000341472 TTC3P53804 2025 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 TBKBP1A7MCY6 615 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 NPEPPSP55786 919 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 CALCRLQ16602 461 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 TCEAL5Q5H9L2 206 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 PLA2G4FQ68DD2 849 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 OTUD6AQ7L8S5 288 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 C4orf19Q8IY42 314 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 P2RX5Q93086 422 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 KIF2CQ99661 725 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 ZSWIM4Q9H7M6 989 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 UBE2ZQ9H832 354 aaPredicted RBP22.58■■□□□ 1.21
SYNE2-201ENST00000341472 PPME1Q9Y570 386 aa22.58■■□□□ 1.21
SYNE2-201ENST00000341472 GUCY1B3Q02153 619 aa22.57■■□□□ 1.2
SYNE2-201ENST00000341472 SPOUT1Q5T280 376 aaKnown RBP22.57■■□□□ 1.2
SYNE2-201ENST00000341472 RHPN2Q8IUC4 686 aa22.57■■□□□ 1.2
SYNE2-201ENST00000341472 SLC7A3Q8WY07 619 aa22.57■■□□□ 1.2
SYNE2-201ENST00000341472 DYDC2Q96IM9 177 aa22.57■■□□□ 1.2
SYNE2-201ENST00000341472 C8orf76Q96K31 380 aa22.57■■□□□ 1.2
SYNE2-201ENST00000341472 INO80BQ9C086 356 aaPredicted RBP22.57■■□□□ 1.2
SYNE2-201ENST00000341472 ALG13Q9NP73 1137 aaKnown RBP22.57■■□□□ 1.2
SYNE2-201ENST00000341472 SH2B1Q9NRF2 756 aaPredicted RBP22.57■■□□□ 1.2
SYNE2-201ENST00000341472 WRAP73Q9P2S5 460 aaPredicted RBP22.57■■□□□ 1.2
SYNE2-201ENST00000341472 COL4A6Q14031 1691 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 A0A087WZ62 844 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 NCK2O43639 380 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 CSDE1O75534 798 aaKnown RBP22.56■■□□□ 1.2
SYNE2-201ENST00000341472 SLITRK3O94933 977 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 FGFR4P22455 802 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 KCNA5P22460 613 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 SPIRE1Q08AE8 756 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 CTTNQ14247 550 aaKnown RBP22.56■■□□□ 1.2
SYNE2-201ENST00000341472 ZNF410Q86VK4 478 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 TPH2Q8IWU9 490 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 ZNF579Q8NAF0 562 aaKnown RBP22.56■■□□□ 1.2
SYNE2-201ENST00000341472 KLHL23Q8NBE8 558 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 SPPL3Q8TCT6 385 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 FDXACB1Q9BRP7 624 aaPredicted RBP22.56■■□□□ 1.2
SYNE2-201ENST00000341472 LXNQ9BS40 222 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 AAASQ9NRG9 546 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 PCDHB12Q9Y5F1 795 aa22.56■■□□□ 1.2
SYNE2-201ENST00000341472 SPTBN5Q9NRC6 3674 aaKnown RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 HOXA2O43364 376 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 NEMFO60524 1076 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 FGFR1P11362 822 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 ATP2B1P20020 1258 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 YWHABP31946 246 aaKnown RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 RFC5P40937 340 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 TXKP42681 527 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 HMGN5P82970 282 aaKnown RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 NECAB3Q96P71 396 aaPredicted RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 TTC12Q9H892 705 aaPredicted RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 CHST12Q9NRB3 414 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 TYW1Q9NV66 732 aaKnown RBP22.55■■□□□ 1.2
SYNE2-201ENST00000341472 DACT1Q9NYF0 836 aa22.55■■□□□ 1.2
SYNE2-201ENST00000341472 ITGB1P05556 798 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 RBM25P49756 843 aaKnown RBP22.54■■□□□ 1.2
SYNE2-201ENST00000341472 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
SYNE2-201ENST00000341472 CYP4A11Q02928 519 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 LEXMQ3ZCV2 418 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 XKR9Q5GH70 373 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 EP400NLQ6ZTU2 488 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 ECHDC2Q86YB7 292 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 KSR1Q8IVT5 923 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 FAM184AQ8NB25 1140 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 PRPF31Q8WWY3 499 aaKnown RBP22.54■■□□□ 1.2
SYNE2-201ENST00000341472 MTMR9Q96QG7 549 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 HSD17B14Q9BPX1 270 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 EIF2AK1Q9BQI3 630 aaKnown RBP22.54■■□□□ 1.2
SYNE2-201ENST00000341472 TMEM117Q9H0C3 514 aa22.54■■□□□ 1.2
SYNE2-201ENST00000341472 DHX33Q9H6R0 707 aaKnown RBP22.54■■□□□ 1.2
SYNE2-201ENST00000341472 NCOR1O75376 2440 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 A0A0U1RQF3 1178 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 WNT7AO00755 349 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 SFPQP23246 707 aaKnown RBP eCLIP22.53■■□□□ 1.2
SYNE2-201ENST00000341472 ABI1Q8IZP0 508 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 RNF169Q8NCN4 708 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 TMEM143Q96AN5 459 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 PABPC5Q96DU9 382 aaKnown RBP22.53■■□□□ 1.2
SYNE2-201ENST00000341472 NLRP4Q96MN2 994 aa22.53■■□□□ 1.2
SYNE2-201ENST00000341472 ZBTB39O15060 712 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 EOMESO95936 686 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 SRGAP2CP0DJJ0 459 aa22.52■■□□□ 1.2
SYNE2-201ENST00000341472 CAMK1Q14012 370 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms