RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 P2RX5Q93086 422 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PLAAQ9Y263 795 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PARP14Q460N5 1801 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 KRT15P19012 456 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 VCAM1P19320 739 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 RFX8Q6ZV50 586 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 RPAINQ86UA6 219 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PAF1Q8N7H5 531 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 LACRTQ9GZZ8 138 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 HTTP42858 3142 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 A0A1B0GUA9 196 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 ACSL3O95573 720 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 USP50Q70EL3 339 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 HDAC7Q8WUI4 952 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 PANX2Q96RD6 677 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 SNX24Q9Y343 169 aa11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 COL11A1P12107 1806 aaPredicted RBP11.34□□□□□ -0.59
CAPRIN1-201ENST00000341394 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 GKAP1Q5VSY0 366 aaPredicted RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 PAGR1Q9BTK6 254 aa11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 CD248Q9HCU0 757 aa11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 PANK4Q9NVE7 773 aa11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 MTRF1LQ9UGC7 380 aaKnown RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.59
CAPRIN1-201ENST00000341394 POC1B-GALNT4F8VUJ3 575 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 SKAP2O75563 359 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 CCDC172P0C7W6 258 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ARHGAP25P42331 645 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 BIRC3Q13489 604 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ARL6IP4Q66PJ3 421 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 DENND2CQ68D51 928 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 WNK4Q96J92 1243 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 NUP58Q9BVL2 599 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 NDST4Q9H3R1 872 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 MEIS2O14770 477 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 TCP1P17987 556 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 CDC25CP30307 473 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 FAM26FQ5R3K3 315 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF658Q5TYW1 1059 aaPredicted RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF449Q6P9G9 518 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ATG4CQ96DT6 458 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 CCDC51Q96ER9 411 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 MED15Q96RN5 788 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 NAP1L4Q99733 375 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 IKBKGQ9Y6K9 419 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 RLFQ13129 1914 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 NR2F2P24468 414 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ERVK-24P63145 666 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 TRIM65Q6PJ69 517 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 HSD3B7Q9H2F3 369 aa11.33□□□□□ -0.6
CAPRIN1-201ENST00000341394 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 LAD1O00515 517 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 VGLL4Q14135 290 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 RRAGCQ9HB90 399 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 NKIRAS1Q9NYS0 192 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 SYNPO2Q9UMS6 1093 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 USP2O75604 605 aaPredicted RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 YY1P25490 414 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 MAGOHP61326 146 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 NAALADL2Q58DX5 795 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 MAGOHBQ96A72 148 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 NSRP1Q9H0G5 558 aaKnown RBP11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 SYNCQ9H7C4 482 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 FAM184BQ9ULE4 1060 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 OTOFQ9HC10 1997 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 TXNDC9O14530 226 aa11.32□□□□□ -0.6
CAPRIN1-201ENST00000341394 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms