RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 CYP3A7-CYP3A51PA0A087WV96 503 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 FAM221BA6H8Z2 402 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 DHX15O43143 795 aaKnown RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 TIMP1P01033 207 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 SUPT20HL2P0C7V6 817 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 CYP3A7P24462 503 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 NONOQ15233 471 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■■■■□ 26.2
TPM3-207ENST00000341372 KIAA0753Q2KHM9 967 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 MEI1Q5TIA1 1274 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 FBF1Q8TES7 1133 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 CTAGE1Q96RT6 745 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 TRPV6Q9H1D0 765 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 TSPAN10Q9H1Z9 355 aaPredicted RBP11.6□□□□□ -0.55
TPM3-207ENST00000341372 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
TPM3-207ENST00000341372 TRIP12Q14669 1992 aaPredicted RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 MMP1P03956 469 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 RAG1P15918 1043 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 TCF7P36402 384 aaPredicted RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 ORC1Q13415 861 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 Q4G0T1 1027 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 NOC4LQ9BVI4 516 aaKnown RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 TRMT13Q9NUP7 481 aaKnown RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 FANCLQ9NW38 375 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 PKD2L1Q9P0L9 805 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 WDR81Q562E7 1941 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 PPP1R12AO14974 1030 aaPredicted RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 KRT2P35908 639 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 PRR16Q569H4 304 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 KRT40Q6A162 431 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 BADQ92934 168 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 LBHD1Q9BQE6 289 aaPredicted RBP11.59□□□□□ -0.55
TPM3-207ENST00000341372 IER2Q9BTL4 223 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 HDAC6Q9UBN7 1215 aa11.59□□□□□ -0.55
TPM3-207ENST00000341372 IGKV6D-21A0A0A0MT36 114 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 STAU1O95793 577 aaKnown RBP11.58□□□□□ -0.56
TPM3-207ENST00000341372 CCNE2O96020 404 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 ACTR2P61160 394 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 FAM47CQ5HY64 1035 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
TPM3-207ENST00000341372 MFSD5Q6N075 450 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 THAP11Q96EK4 314 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 PCYT2Q99447 389 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 ZNF577Q9BSK1 485 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 TBC1D22BQ9NU19 505 aa11.58□□□□□ -0.56
TPM3-207ENST00000341372 ZNF215Q9UL58 517 aaPredicted RBP11.58□□□□□ -0.56
TPM3-207ENST00000341372 MSH4O15457 936 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 TDP2O95551 362 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 GCFC2P16383 781 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 ETFBP38117 255 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 SP4Q02446 784 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 NR5A1Q13285 461 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 INF2Q27J81 1249 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 EARS2Q5JPH6 523 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 ODR4Q5SWX8 454 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 C7orf31Q8N865 590 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 PPP1R13LQ8WUF5 828 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 HIPK3Q9H422 1215 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 LRFN2Q9ULH4 789 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 CYP2C9P11712 490 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 ADAM17P78536 824 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 FPGSQ05932 587 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 TRIM29Q14134 588 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 ETNPPLQ8TBG4 499 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 RIT2Q99578 217 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 UBE2OQ9C0C9 1292 aaKnown RBP11.57□□□□□ -0.56
TPM3-207ENST00000341372 WNT8AQ9H1J5 351 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 C12orf49Q9H741 205 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
TPM3-207ENST00000341372 MYH9P35579 1960 aaKnown RBP11.56□□□□□ -0.56
TPM3-207ENST00000341372 BTBD18B2RXH4 712 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
TPM3-207ENST00000341372 KRT76Q01546 638 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 PTGISQ16647 500 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 TRIM71Q2Q1W2 868 aaKnown RBP11.56□□□□□ -0.56
TPM3-207ENST00000341372 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
TPM3-207ENST00000341372 B3GNT9Q6UX72 402 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms