RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.45
LITAF-201ENST00000339430 PSD3Q9NYI0 1048 aa17.83■□□□□ 0.45
LITAF-201ENST00000339430 AJAP1Q9UKB5 411 aaPredicted RBP17.83■□□□□ 0.45
LITAF-201ENST00000339430 PIK3CDO00329 1044 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 SLITRK3O94933 977 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 CAPN2P17655 700 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 PTPROQ16827 1216 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 SND1Q7KZF4 910 aaKnown RBP eCLIP17.83■□□□□ 0.44
LITAF-201ENST00000339430 OTOP1Q7RTM1 612 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 IRF2BP2Q7Z5L9 587 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 LDHDQ86WU2 507 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 ERO1BQ86YB8 467 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 MYCT1Q8N699 235 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 AENQ8WTP8 325 aaKnown RBP17.83■□□□□ 0.44
LITAF-201ENST00000339430 AGBL1Q96MI9 1066 aa17.83■□□□□ 0.44
LITAF-201ENST00000339430 FAM13AO94988 1023 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 EPB41P11171 864 aaKnown RBP17.82■□□□□ 0.44
LITAF-201ENST00000339430 AARSP49588 968 aaKnown RBP eCLIP17.82■□□□□ 0.44
LITAF-201ENST00000339430 ITIH3Q06033 890 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 PPATQ06203 517 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 TRAF1Q13077 416 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 ZSCAN26Q16670 478 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 C8orf74Q6P047 294 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 CPXCR1Q8N123 301 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 GOLPH3Q9H4A6 298 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 ZNF536O15090 1300 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 COG2Q14746 738 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 EPHA7Q15375 998 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 CFAP221Q4G0U5 840 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 SH3D19Q5HYK7 790 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 TAF3Q5VWG9 929 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 HSD17B14Q9BPX1 270 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 SLC38A10Q9HBR0 1119 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 GCNT4Q9P109 453 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 STK24Q9Y6E0 443 aa17.82■□□□□ 0.44
LITAF-201ENST00000339430 SPDYE5A6NIY4 337 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 TGFB1I1O43294 461 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 ICAM1P05362 532 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 ATG4CQ96DT6 458 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 WNK4Q96J92 1243 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 STIM2Q9P246 746 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 CCPG1Q9ULG6 757 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 GRID2IPA4D2P6 1211 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 GCOM1H8Y6P7 765 aaPredicted RBP17.81■□□□□ 0.44
LITAF-201ENST00000339430 AGPSO00116 658 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 PSMD10O75832 226 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 POLR2MP0CAP2 368 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
LITAF-201ENST00000339430 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 SLC35C1Q96A29 364 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 TRERF1Q96PN7 1200 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 RAVER2Q9HCJ3 691 aaKnown RBP17.81■□□□□ 0.44
LITAF-201ENST00000339430 PLCB1Q9NQ66 1216 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 WRAP73Q9P2S5 460 aaPredicted RBP17.81■□□□□ 0.44
LITAF-201ENST00000339430 TSKSQ9UJT2 592 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 ZMYM2Q9UBW7 1377 aa17.81■□□□□ 0.44
LITAF-201ENST00000339430 MYH11P35749 1972 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 FAM170AA1A519 330 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 VWA5AO00534 786 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 GAS7O60861 476 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 TREML2Q5T2D2 321 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 LDLRAD1Q5T700 205 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 MEI1Q5TIA1 1274 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 GBP6Q6ZN66 633 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 CATSPERGQ6ZRH7 1159 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 CTDP1Q9Y5B0 961 aaPredicted RBP17.8■□□□□ 0.44
LITAF-201ENST00000339430 PCDHGC5Q9Y5F6 944 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 RBBP6Q7Z6E9 1792 aaKnown RBP17.8■□□□□ 0.44
LITAF-201ENST00000339430 NOP2P46087 812 aaKnown RBP17.8■□□□□ 0.44
LITAF-201ENST00000339430 C1orf186Q6ZWK4 172 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
LITAF-201ENST00000339430 MRPL11Q9Y3B7 192 aaKnown RBP17.8■□□□□ 0.44
LITAF-201ENST00000339430 PTPRFP10586 1907 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 GOLGA6BA6NDN3 693 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 ZSCAN5CA6NGD5 496 aaPredicted RBP17.79■□□□□ 0.44
LITAF-201ENST00000339430 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
LITAF-201ENST00000339430 ZBED4O75132 1171 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 ARP10275 920 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 ACTN2P35609 894 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 METTL14Q9HCE5 456 aaKnown RBP17.79■□□□□ 0.44
LITAF-201ENST00000339430 TUFT1Q9NNX1 390 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 OLFML3Q9NRN5 406 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 PKD2L1Q9P0L9 805 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 ESYT3A0FGR9 886 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 GAP43P17677 238 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 GADL1Q6ZQY3 521 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 FAM186BQ8IYM0 893 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 GOLGA6L1Q8N7Z2 621 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 AFAP1L1Q8TED9 768 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 SLC5A5Q92911 643 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 ZNF577Q9BSK1 485 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 UNC45AQ9H3U1 944 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 PARVGQ9HBI0 331 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 NAGPAQ9UK23 515 aa17.79■□□□□ 0.44
LITAF-201ENST00000339430 SLC16A3O15427 465 aaKnown RBP17.78■□□□□ 0.44
LITAF-201ENST00000339430 ALAS1P13196 640 aa17.78■□□□□ 0.44
LITAF-201ENST00000339430 DSG3P32926 999 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms