RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PLS3P13797 630 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ADSSP30520 456 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 NPTX2P47972 431 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC122Q5T0U0 273 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM186BQ8IYM0 893 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 SAMD3Q8N6K7 520 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 FGD4Q96M96 766 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC43Q96MW1 224 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 GANQ9H2C0 597 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNHIT6Q9NWK9 470 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 POTEB2H3BUK9 544 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 LYPLA2O95372 231 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 EPB41P11171 864 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 HNRNPH3P31942 346 aaKnown RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 JAK3P52333 1124 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 KIF11P52732 1056 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 PRKCEQ02156 737 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 EXOC3L4Q17RC7 722 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 CHST13Q8NET6 341 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 NEK9Q8TD19 979 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 PLEKHO2Q8TD55 490 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 ZBTB10Q96DT7 871 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 SIX2Q9NPC8 291 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 KCND2Q9NZV8 630 aa8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
SRFBP1-201ENST00000339397 KIF5CO60282 957 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 EXOC3O60645 756 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 SRGAP2O75044 1071 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 UCHL3P15374 230 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 UBA1P22314 1058 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 SFNP31947 248 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 RAPGEF1Q13905 1077 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 ASTE1Q2TB18 679 aaPredicted RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 MTERF2Q49AM1 385 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 KLHDC7AQ5VTJ3 777 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 TRIM50Q86XT4 487 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 COPS5Q92905 334 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 TMEM143Q96AN5 459 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 PCYT2Q99447 389 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 POP1Q99575 1024 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 MLXIPQ9HAP2 919 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 GCNT4Q9P109 453 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 SEL1LQ9UBV2 794 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 AGTPBP1Q9UPW5 1226 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 GOLGA6L9A6NEM1 432 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 MAFGO15525 162 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 ATXN8OSP0DMR3 200 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 RPL13P26373 211 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 NF2P35240 595 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 PSMC2P35998 433 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 DRP2Q13474 957 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 TDRD12Q587J7 1177 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 GJC2Q5T442 439 aaPredicted RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 KIAA1328Q86T90 577 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 PROCA1Q8NCQ7 364 aaPredicted RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 TMEM161BQ8NDZ6 487 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 SAAL1Q96ER3 474 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 PDGFCQ9NRA1 345 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 CEP72Q9P209 647 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 PUF60Q9UHX1 559 aaKnown RBP8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
SRFBP1-201ENST00000339397 A0A087X0T9 212 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 GSTTP1A0A1W2PQM5 241 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 EIF3CLB5ME19 914 aaKnown RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 CXCL11O14625 94 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 AKR1B10O60218 316 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM228BP0C875 321 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 MARK3P27448 753 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 GTF2BQ00403 316 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 HSDL1Q3SXM5 330 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 GNPTABQ3T906 1256 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 C1orf220Q5T0J3 134 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 XRRA1Q6P2D8 792 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC39A4Q6P5W5 647 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 IRF2BP2Q7Z5L9 587 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ZC3H15Q8WU90 426 aaKnown RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 ANKRD7Q92527 254 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC10A4Q96EP9 437 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 EIF3CQ99613 913 aaKnown RBP8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PACSIN1Q9BY11 444 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 DEF6Q9H4E7 631 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 HAUS4Q9H6D7 363 aa8.09□□□□□ -1.11
SRFBP1-201ENST00000339397 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms