RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ECHDC2Q86YB7 292 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 CRYGNQ8WXF5 182 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 ANO2Q9NQ90 1003 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 TMOD1P28289 359 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 ITIH3Q06033 890 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 MTMR3Q13615 1198 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 CES5AQ6NT32 575 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 EFCAB12Q6NXP0 572 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 SLC39A11Q8N1S5 342 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 FAM167AQ96KS9 214 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 ADAM7Q9H2U9 754 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 POMKQ9H5K3 350 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 CACNA1HO95180 2353 aa13.02□□□□□ -0.33
CSMD2-202ENST00000338325 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 C2orf71A6NGG8 1288 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 H0Y858 1186 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
CSMD2-202ENST00000338325 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
CSMD2-202ENST00000338325 EXOSC10Q01780 885 aaKnown RBP13.01□□□□□ -0.33
CSMD2-202ENST00000338325 MCTP2Q6DN12 878 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 LRRC71Q8N4P6 559 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 MRPL43Q8N983 215 aaKnown RBP13.01□□□□□ -0.33
CSMD2-202ENST00000338325 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 TCEANC2Q96MN5 208 aa13.01□□□□□ -0.33
CSMD2-202ENST00000338325 KLF18A0A0U1RQI7 1052 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 ESYT2A0FGR8 921 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 BRD1O95696 1058 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 EOMESO95936 686 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 CDC27P30260 824 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 MTHFRP42898 656 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 RCAN1P53805 252 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
CSMD2-202ENST00000338325 HELQQ8TDG4 1101 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 MRPL9Q9BYD2 267 aaKnown RBP13□□□□□ -0.33
CSMD2-202ENST00000338325 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
CSMD2-202ENST00000338325 SAMM50Q9Y512 469 aa13□□□□□ -0.33
CSMD2-202ENST00000338325 A0A0U1RQF3 1178 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 WDR64B1ANS9 1081 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 CLASP2O75122 1294 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 OATP04181 439 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 CA8P35219 290 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 GPC3P51654 580 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 PRR16Q569H4 304 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 ZNF668Q96K58 619 aaPredicted RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 C6orf50Q9HD87 102 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 DZANK1Q9NVP4 752 aa12.99□□□□□ -0.33
CSMD2-202ENST00000338325 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
CSMD2-202ENST00000338325 ADAMTS3O15072 1205 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ALDH7A1P49419 539 aaKnown RBP12.98□□□□□ -0.33
CSMD2-202ENST00000338325 BCAR1P56945 870 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 PRKCEQ02156 737 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 RARS2Q5T160 578 aaKnown RBP12.98□□□□□ -0.33
CSMD2-202ENST00000338325 KIAA1841Q6NSI8 718 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 TMEM105Q8N8V8 129 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 TMEM169Q96HH4 297 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ZBP1Q9H171 429 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 SMOC2Q9H3U7 446 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 NRBP2Q9NSY0 501 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 MYO15AQ9UKN7 3530 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.98□□□□□ -0.33
CSMD2-202ENST00000338325 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ZNF862O60290 1169 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 CXCL14O95715 111 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ASGR2P07307 311 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 FGFR4P22455 802 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 CIITAP33076 1130 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 ZDHHC14Q8IZN3 488 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 RSPH1Q8WYR4 309 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 LENG9Q96B70 501 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms