RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CDKL5O76039 1030 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 XBP1P17861 261 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 NDUFV1P49821 464 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 GATMP50440 423 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 DNM2P50570 870 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 CLCN3P51790 818 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 FAM189BP81408 668 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 UBE3AQ05086 875 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 TOB2Q14106 344 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 CLUL1Q15846 466 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 CTC1Q2NKJ3 1217 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 Q4G0T1 1027 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 MIER3Q7Z3K6 550 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 FAM177A1Q8N128 213 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 LENG9Q96B70 501 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 SLKQ9H2G2 1235 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 TLE6Q9H808 572 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 RAPGEFL1Q9UHV5 662 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
CAPN3-202ENST00000337571 KIAA1671Q9BY89 1806 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 MARCH6O60337 910 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 DNAJB1P25685 340 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 LTBRP36941 435 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 NRIP1P48552 1158 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 PRKCEQ02156 737 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 ADAM15Q13444 863 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-202ENST00000337571 PDE12Q6L8Q7 609 aaKnown RBP12□□□□□ -0.49
CAPN3-202ENST00000337571 RBM23Q86U06 439 aaKnown RBP12□□□□□ -0.49
CAPN3-202ENST00000337571 ADHFE1Q8IWW8 467 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 NLRP7Q8WX94 980 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-202ENST00000337571 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 TYW1Q9NV66 732 aaKnown RBP12□□□□□ -0.49
CAPN3-202ENST00000337571 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
CAPN3-202ENST00000337571 CD207Q9UJ71 328 aa12□□□□□ -0.49
CAPN3-202ENST00000337571 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
CAPN3-202ENST00000337571 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 FSD2A1L4K1 749 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 FAM86C2PA6NEL3 165 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 MBTPS2O43462 519 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 ZNF862O60290 1169 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 PSMD10O75832 226 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 FGF18O76093 207 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 LAG3P18627 525 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 CYP3A7P24462 503 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 GTF2F1P35269 517 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 KRT17Q04695 432 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 DLX2Q07687 328 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 CAMK1Q14012 370 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 XKR3Q5GH77 459 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 RNF169Q8NCN4 708 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 GJA10Q969M2 543 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 NIFKQ9BYG3 293 aaKnown RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 GCOM2Q9BZD3 368 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 TMEM117Q9H0C3 514 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 ADAMTS10Q9H324 1103 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 TLR9Q9NR96 1032 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 DACT1Q9NYF0 836 aa11.99□□□□□ -0.49
CAPN3-202ENST00000337571 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
CAPN3-202ENST00000337571 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 LINC01565O15544 149 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 DCXO43602 365 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 TDP2O95551 362 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 EOMESO95936 686 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 SRGAP2BP0DMP2 458 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 FGFR1P11362 822 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 IRS1P35568 1242 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 GPC3P51654 580 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 ZP2Q05996 745 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 DSC3Q14574 896 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 UGCGQ16739 394 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 MOXD1Q6UVY6 613 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 ADGRD2Q7Z7M1 963 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 COLGALT1Q8NBJ5 622 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
CAPN3-202ENST00000337571 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-202ENST00000337571 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
CAPN3-202ENST00000337571 JPH2Q9BR39 696 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-202ENST00000337571 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms