RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 MTA3Q9BTC8 594 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 DYRK4Q9NR20 520 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 HACD3Q9P035 362 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 SP8Q8IXZ3 490 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 TSPYL2Q9H2G4 693 aaPredicted RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 CNOT8Q9UFF9 292 aaKnown RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 ARL4CP56559 192 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 SFR1Q86XK3 245 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 FAM213AQ9BRX8 229 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 GABBR1Q9UBS5 961 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 NR3C1P04150 777 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 ZKSCAN8Q15776 578 aaPredicted RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 SWSAP1Q6NVH7 229 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 GPT2Q8TD30 523 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 WHAMMQ8TF30 809 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 DDX50Q9BQ39 737 aaKnown RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 TRIM15Q9C019 465 aa27.54■■■□□ 2
AGAP1-202ENST00000336665 SAMSN1Q9NSI8 373 aaKnown RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 PACSIN2Q9UNF0 486 aaPredicted RBP27.54■■■□□ 2
AGAP1-202ENST00000336665 MB21D1Q8N884 522 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
AGAP1-202ENST00000336665 CYP26B1Q9NR63 512 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 PBRM1Q86U86 1689 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 LUC7L3O95232 432 aaKnown RBP27.53■■■□□ 2
AGAP1-202ENST00000336665 CYP2D6P10635 497 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 PLS3P13797 630 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 AP3M2P53677 418 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 TAF11Q15544 211 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 NDUFA10O95299 355 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 UPF3AQ9H1J1 476 aaKnown RBP27.53■■■□□ 2
AGAP1-202ENST00000336665 RALAP11233 206 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 KCNJ6P48051 423 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 DYDC2Q96IM9 177 aa27.53■■■□□ 2
AGAP1-202ENST00000336665 SLC16A4O15374 487 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 PDCD7Q8N8D1 485 aaKnown RBP27.52■■■□□ 2
AGAP1-202ENST00000336665 FMO2Q99518 471 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 ANAPC7Q9UJX3 599 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 STK36Q9NRP7 1315 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 ZNF189O75820 626 aaPredicted RBP27.52■■■□□ 2
AGAP1-202ENST00000336665 TMEM270Q6UE05 265 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 PANX2Q96RD6 677 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 CDK12Q9NYV4 1490 aaPredicted RBP27.52■■■□□ 2
AGAP1-202ENST00000336665 ZRANB2O95218 330 aaKnown RBP eCLIP27.52■■■□□ 27e-6■■■■□ 22.8
AGAP1-202ENST00000336665 NSUN2Q08J23 767 aaKnown RBP eCLIP27.52■■■□□ 2
AGAP1-202ENST00000336665 HINFPQ9BQA5 517 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 MRPL46Q9H2W6 279 aaKnown RBP27.52■■■□□ 2
AGAP1-202ENST00000336665 PODXLO00592 558 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 HSPA4LO95757 839 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 CDC42EP1Q00587 391 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 EFHBQ8N7U6 833 aa27.52■■■□□ 2
AGAP1-202ENST00000336665 CCDC188H7C350 402 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 TRAPPC3O43617 180 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 ARHGDIAP52565 204 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 TBCCQ15814 346 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 TBK1Q9UHD2 729 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 SUGT1Q9Y2Z0 365 aa27.51■■■□□ 2
AGAP1-202ENST00000336665 ATP8B1O43520 1251 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 GLE1Q53GS7 698 aaKnown RBP27.51■■□□□ 1.99
AGAP1-202ENST00000336665 RAD54LQ92698 747 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 PVALEFA0A1B0GWK0 134 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 NCF2P19878 526 aaPredicted RBP27.51■■□□□ 1.99
AGAP1-202ENST00000336665 PKP1Q13835 747 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 TXNRD1Q16881 649 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 TRPV6Q9H1D0 765 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 F5H6K3 240 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 M0QYV0 167 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 KRT38O76015 456 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 ESRRGP62508 458 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 KLRC3Q07444 240 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 MXD4Q14582 209 aaPredicted RBP27.51■■□□□ 1.99
AGAP1-202ENST00000336665 USP17L6PQ6QN14 398 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 C11orf57Q6ZUT1 292 aaPredicted RBP27.51■■□□□ 1.99
AGAP1-202ENST00000336665 ULK4Q96C45 1275 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 POLR3FQ9H1D9 316 aaPredicted RBP27.51■■□□□ 1.99
AGAP1-202ENST00000336665 SPTLC3Q9NUV7 552 aa27.51■■□□□ 1.99
AGAP1-202ENST00000336665 CYP27B1O15528 508 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 ACCSLQ4AC99 568 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 EFHC2Q5JST6 749 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 ITPRIPL1Q6GPH6 555 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 VSTM4Q8IW00 320 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 SP110Q9HB58 689 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 PDE11AQ9HCR9 933 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 TTC30BQ8N4P2 665 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 SH3TC2Q8TF17 1288 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 PRDM5Q9NQX1 630 aaPredicted RBP27.5■■□□□ 1.99
AGAP1-202ENST00000336665 CEP72Q9P209 647 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 FBXW4P57775 412 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 C2orf54Q08AI8 447 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 GRM4Q14833 912 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 TADA2BQ86TJ2 420 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 TEX2Q8IWB9 1127 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 ADAMTS1Q9UHI8 967 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 SYNGAP1Q96PV0 1343 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 ACRBPQ8NEB7 543 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 GRIN3BO60391 1043 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 CUL1Q13616 776 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 CEP95Q96GE4 821 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 ZMYND12Q9H0C1 365 aa27.5■■□□□ 1.99
AGAP1-202ENST00000336665 PRR36Q9H6K5 1346 aa27.49■■□□□ 1.99
AGAP1-202ENST00000336665 HNRNPCL2B2RXH8 293 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms