RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 MGEA5O60502 916 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 LPXNO60711 386 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 DGKIO75912 1065 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 DARSP14868 501 aaKnown RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 POU3F3P20264 500 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 CTNNB1P35222 781 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 RFC5P40937 340 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 ORC2Q13416 577 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 ZNF174Q15697 407 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 PAN2Q504Q3 1202 aaKnown RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 RHPN2Q8IUC4 686 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 TMEM192Q8IY95 271 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 CEP89Q96ST8 783 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 GCOM2Q9BZD3 368 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 TMEM60Q9H2L4 133 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 RGS18Q9NS28 235 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-203ENST00000336520 THEGQ9P2T0 379 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 PCDHB7Q9Y5E2 793 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 POTEMA6NI47 508 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 H3BQV1 296 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 SLITRK3O94933 977 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-203ENST00000336520 GPM6BQ13491 265 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 EMC2Q15006 297 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 PTPROQ16827 1216 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 CMTR2Q8IYT2 770 aaKnown RBP12.68□□□□□ -0.38
MRPL55-203ENST00000336520 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
MRPL55-203ENST00000336520 NLRP4Q96MN2 994 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 RC3H2Q9HBD1 1191 aaKnown RBP12.68□□□□□ -0.38
MRPL55-203ENST00000336520 SMC3Q9UQE7 1217 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 RWDD3Q9Y3V2 267 aa12.68□□□□□ -0.38
MRPL55-203ENST00000336520 EYSQ5T1H1 3165 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 A0A087WZ62 844 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 C9IYK1 514 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 ZBTB39O15060 712 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 CSDE1O75534 798 aaKnown RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 FGFR4P22455 802 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 SFPQP23246 707 aaKnown RBP eCLIP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 U2AF2P26368 475 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■□□□□ 10
MRPL55-203ENST00000336520 GJB2P29033 226 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 TECP42680 631 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 GATMP50440 423 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 DSC3Q14574 896 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 PSPC1Q8WXF1 523 aaKnown RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 TMEM143Q96AN5 459 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 ZNF689Q96CS4 500 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 HSD17B14Q9BPX1 270 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 FDXACB1Q9BRP7 624 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 C11orf84Q9BUA3 381 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 INO80BQ9C086 356 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 DHX33Q9H6R0 707 aaKnown RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 ATP6V0A4Q9HBG4 840 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-203ENST00000336520 COL4A3BPQ9Y5P4 624 aa12.67□□□□□ -0.38
MRPL55-203ENST00000336520 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 H3BNC9 293 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 GAS2O43903 313 aaKnown RBP12.66□□□□□ -0.38
MRPL55-203ENST00000336520 LYPLA2O95372 231 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 BMPR1AP36894 532 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 NBR1Q14596 966 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 RNF169Q8NCN4 708 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 PRPF31Q8WWY3 499 aaKnown RBP12.66□□□□□ -0.38
MRPL55-203ENST00000336520 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
MRPL55-203ENST00000336520 MRPL38Q96DV4 380 aaKnown RBP12.66□□□□□ -0.38
MRPL55-203ENST00000336520 MTRQ99707 1265 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 TMEM161AQ9NX61 479 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
MRPL55-203ENST00000336520 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
MRPL55-203ENST00000336520 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 DLL1O00548 723 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 HOXA2O43364 376 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 RB1P06400 928 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 SRGAP2CP0DJJ0 459 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 FAM189BP81408 668 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
MRPL55-203ENST00000336520 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 ABI1Q8IZP0 508 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.38
MRPL55-203ENST00000336520 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
MRPL55-203ENST00000336520 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms