RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 WDR11Q9BZH6 1224 aa7.01□□□□□ -1.29
HMG20A-201ENST00000336216 GEMIN8Q9NWZ8 242 aaKnown RBP7.01□□□□□ -1.29
HMG20A-201ENST00000336216 FAM153AQ9UHL3 310 aa7.01□□□□□ -1.29
HMG20A-201ENST00000336216 REXO2Q9Y3B8 237 aaKnown RBP7.01□□□□□ -1.29
HMG20A-201ENST00000336216 CNTNAP4Q9C0A0 1308 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 PHF20L1A8MW92 1017 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 GOLGA8SH3BPF8 625 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 SRGNP10124 158 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 DPEP1P16444 411 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 CNGA1P29973 690 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 NPEPPSP55786 919 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 DHX9Q08211 1270 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 NBPF9Q3BBW0 867 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 SLC10A5Q5PT55 438 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 ALS2CLQ60I27 953 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 PPP1R21Q6ZMI0 780 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 UBL4BQ8N7F7 174 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 LRRC45Q96CN5 670 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 LXNQ9BS40 222 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 MTA3Q9BTC8 594 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 UBXN6Q9BZV1 441 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 ZMYND12Q9H0C1 365 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 MLXIPLQ9NP71 852 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 RNF146Q9NTX7 359 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 MTRF1LQ9UGC7 380 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 SLC9A1P19634 815 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 MXI1P50539 228 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 PLTPP55058 493 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 IFRD2Q12894 506 aaPredicted RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 STRIP1Q5VSL9 837 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 GLYCTKQ8IVS8 523 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 OTUD5Q96G74 571 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 TARSL2A2RTX5 802 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 PALM3A6NDB9 673 aaPredicted RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 ZBTB39O15060 712 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 CALRP27797 417 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 MAGOHP61326 146 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 LRRC63Q05C16 580 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 ZKSCAN8Q15776 578 aaPredicted RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 CEP55Q53EZ4 464 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 CDR2LQ86X02 465 aaPredicted RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 MAGOHBQ96A72 148 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 CCSER1Q9C0I3 900 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 AS3MTQ9HBK9 375 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 CNOT7Q9UIV1 285 aaKnown RBP7□□□□□ -1.29
HMG20A-201ENST00000336216 ANAPC4Q9UJX5 808 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 DNAJC12Q9UKB3 198 aa7□□□□□ -1.29
HMG20A-201ENST00000336216 GLI1P08151 1106 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 MYBP10242 640 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 RCAN1P53805 252 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 DYNLT1P63172 113 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 MYO1EQ12965 1108 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 BAATQ14032 418 aaPredicted RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 TRADDQ15628 312 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 PLA2G4FQ68DD2 849 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 GJB7Q6PEY0 223 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 MICALL2Q8IY33 904 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 C7orf31Q8N865 590 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 PRPF38AQ8NAV1 312 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 REEP2Q9BRK0 252 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 KIFC3Q9BVG8 833 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 NUCKS1Q9H1E3 243 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 MAGEF1Q9HAY2 307 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 GABBR1Q9UBS5 961 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 USP20Q9Y2K6 914 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 EP400Q96L91 3159 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 ANO9A1A5B4 782 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 K7ERI5 159 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 AMPD2Q01433 879 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 KCTD2Q14681 263 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 KNOP1Q1ED39 458 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 TTMPQ5BVD1 217 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 DPP9Q86TI2 863 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 AMIGO3Q86WK7 504 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 CCDC63Q8NA47 563 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 GLIS3Q8NEA6 775 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 MDM1Q8TC05 714 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 ZNF653Q96CK0 615 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 ELAC2Q9BQ52 826 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 FAM213AQ9BRX8 229 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 HEMGNQ9BXL5 484 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 FAM49AQ9H0Q0 323 aaPredicted RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 NOD1Q9Y239 953 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 GOLGA4Q13439 2230 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 A6NNZ2 444 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 RGL2O15211 777 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 CSPG5O95196 566 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 TMEM191BP0C7N4 346 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 CDC25CP30307 473 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
HMG20A-201ENST00000336216 PPP4CP60510 307 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 PSMC6P62333 389 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 TUBB8Q3ZCM7 444 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 EPC2Q52LR7 807 aa6.99□□□□□ -1.29
HMG20A-201ENST00000336216 PPP1R18Q6NYC8 613 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms