RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 DNAJC12Q9UKB3 198 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 NENFQ9UMX5 172 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 PLA2G6O60733 806 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 ITGB5P18084 799 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 DRAP1Q14919 205 aaPredicted RBP19.28■□□□□ 0.68
LRCH3-201ENST00000334859 GLYCTKQ8IVS8 523 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 RIT2Q99578 217 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 ZNF341Q9BYN7 854 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 COL4A5P29400 1685 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 FAM170AA1A519 330 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 CES2O00748 559 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 RAD51CO43502 376 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 OPA1O60313 960 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 GUCY2FP51841 1108 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 NNTQ13423 1086 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 PADI6Q6TGC4 694 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 B3GNT9Q6UX72 402 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 DAAM2Q86T65 1068 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 TTLL6Q8N841 843 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 IL31RAQ8NI17 732 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 HOOK2Q96ED9 719 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 PBKQ96KB5 322 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 STK33Q9BYT3 514 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 KCNH7Q9NS40 1196 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
LRCH3-201ENST00000334859 NFIBO00712 420 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 ICAM1P05362 532 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 ASNSP08243 561 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 FAM153BP0C7A2 387 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 PPP2R5AQ15172 486 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 FAM153CQ494X1 144 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 ALS2CLQ60I27 953 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 ZNF772Q68DY9 489 aaPredicted RBP19.27■□□□□ 0.68
LRCH3-201ENST00000334859 RTKN2Q8IZC4 609 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 DAW1Q8N136 415 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 LNX1Q8TBB1 728 aaPredicted RBP19.27■□□□□ 0.68
LRCH3-201ENST00000334859 LMBR1Q8WVP7 490 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 CASKIN2Q8WXE0 1202 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 DMAC2Q9NW81 257 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 COL20A1Q9P218 1284 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 APEX2Q9UBZ4 518 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 FAM153AQ9UHL3 310 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 SAMM50Q9Y512 469 aa19.27■□□□□ 0.68
LRCH3-201ENST00000334859 LOXHD1Q8IVV2 1947 aa19.27■□□□□ 0.67
LRCH3-201ENST00000334859 GOLGA8KD6RF30 607 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 PGRMC1O00264 195 aaKnown RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 INPP5BP32019 993 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 HSD17B4P51659 736 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 GALCP54803 685 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 BFSP1Q12934 665 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 MAPK7Q13164 816 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 TNIP1Q15025 636 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 NEK9Q8TD19 979 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 HOMER2Q9NSB8 354 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 SEPT11Q9NVA2 429 aaKnown RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 SCAF8Q9UPN6 1271 aaKnown RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 ATP8B3O60423 1300 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 A0A0A6YYK5 440 aaPredicted RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 TBC1D12O60347 775 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 RPS6KA5O75582 802 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 LMNB1P20700 586 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 PPFIA1Q13136 1202 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 LRRC31Q6UY01 552 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 CCDC43Q96MW1 224 aaKnown RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 SH3GL2Q99962 352 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 AP1M1Q9BXS5 423 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 INTUQ9ULD6 942 aa19.26■□□□□ 0.67
LRCH3-201ENST00000334859 NOC2LQ9Y3T9 749 aaKnown RBP19.26■□□□□ 0.67
LRCH3-201ENST00000334859 LRRN2O75325 713 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 ABCB4P21439 1286 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 PTGER2P43116 358 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 FOXR1Q6PIV2 292 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 SYCE1Q8N0S2 351 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 CPXCR1Q8N123 301 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 METTL13Q8N6R0 699 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 PSMD1Q99460 953 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 STK32BQ9NY57 414 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 ZNF536O15090 1300 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 PPP1R37O75864 691 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 KRT13P13646 458 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 TRADDQ15628 312 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 CFAP58Q5T655 872 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 ACTRT1Q8TDG2 376 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 ZIM3Q96PE6 472 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 PCIF1Q9H4Z3 704 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
LRCH3-201ENST00000334859 TMEM59LQ9UK28 342 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
LRCH3-201ENST00000334859 TISP43B9A030 160 aa19.24■□□□□ 0.67
LRCH3-201ENST00000334859 ALAS1P13196 640 aa19.24■□□□□ 0.67
LRCH3-201ENST00000334859 HLTFQ14527 1009 aaKnown RBP eCLIP19.24■□□□□ 0.67
LRCH3-201ENST00000334859 FAM83AQ86UY5 434 aa19.24■□□□□ 0.67
LRCH3-201ENST00000334859 CTNNBL1Q8WYA6 563 aaPredicted RBP19.24■□□□□ 0.67
LRCH3-201ENST00000334859 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.24■□□□□ 0.677e-7■■□□□ 13.4
LRCH3-201ENST00000334859 P4HBP07237 508 aaKnown RBP19.23■□□□□ 0.67
LRCH3-201ENST00000334859 CCDC172P0C7W6 258 aa19.23■□□□□ 0.67
LRCH3-201ENST00000334859 ITGB3BPQ13352 177 aaPredicted RBP19.23■□□□□ 0.67
LRCH3-201ENST00000334859 DNAJC21Q5F1R6 531 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms