RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FBXO33Q7Z6M2 555 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 KIF2BQ8N4N8 673 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 FBXO25Q8TCJ0 367 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 KLHL29Q96CT2 875 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 ERP44Q9BS26 406 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 MTFR1LQ9H019 292 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 NOP53Q9NZM5 478 aaKnown RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 DDX25Q9UHL0 483 aaKnown RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 C15orf41Q9Y2V0 281 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 CFAP73A6NFT4 308 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 GSTA1P08263 222 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 GALCP54803 685 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 GRAPQ13588 217 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 ITIH4Q14624 930 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 UBE2SQ16763 222 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 GRAPLQ8TC17 118 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 CICQ96RK0 1608 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 PLA2G4BP0C869 781 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 CPSF2Q9P2I0 782 aaKnown RBP14.86□□□□□ -0.03
SYNE3-201ENST00000334258 POLLQ9UGP5 575 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 SLC12A4Q9UP95 1085 aa14.86□□□□□ -0.03
SYNE3-201ENST00000334258 PON1P27169 355 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 OTUD6AQ7L8S5 288 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 ECT2Q9H8V3 914 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 ZNF287Q9HBT7 754 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 RASAL2Q9UJF2 1139 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 DBR1Q9UK59 544 aaKnown RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 AGAP1Q9UPQ3 857 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 EIF4E1BA6NMX2 242 aaKnown RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 USP17L5A8MUK1 530 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 MMP13P45452 471 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 SEPT2Q15019 361 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 CRELD2Q6UXH1 353 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 PIGWQ7Z7B1 504 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 GLYCTKQ8IVS8 523 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 RASGEF1CQ8N431 466 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 CCHCR1Q8TD31 782 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 PRCCQ92733 491 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 RNF25Q96BH1 459 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 NAP1L3Q99457 506 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-201ENST00000334258 SEMA4AQ9H3S1 761 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 MLXIPLQ9NP71 852 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 PPP1R9AQ9ULJ8 1098 aa14.85□□□□□ -0.03
SYNE3-201ENST00000334258 IGF2BP3O00425 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 RTN2O75298 545 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 BAG3O95817 575 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 RASA1P20936 1047 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 FGFR4P22455 802 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 C6orf118Q5T5N4 469 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 EPS8L3Q8TE67 593 aaKnown RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 ATXN2LQ8WWM7 1075 aaKnown RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 MTRF1LQ9UGC7 380 aaKnown RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 TRPC6Q9Y210 931 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 PCDHB13Q9Y5F0 798 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 RPS6KL1Q9Y6S9 549 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 MYH7BA7E2Y1 1941 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 POTECB2RU33 542 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 DDX3XO00571 662 aaKnown RBP eCLIP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 NQO1P15559 274 aaKnown RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 CHRNA5P30532 468 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 PDE6CP51160 858 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 ORC2Q13416 577 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 DEFB132Q7Z7B7 95 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 SLC35G2Q8TBE7 412 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 PGM2Q96G03 612 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 KCNK9Q9NPC2 374 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 BATF3Q9NR55 127 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 TMEM110-MUSTN1A8MSY1 372 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 RASGRF2O14827 1237 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 STAT1P42224 750 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 SCNN1DP51172 638 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 EIF6P56537 245 aaKnown RBP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 GTF2IP78347 998 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 SNX1Q13596 522 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 JAMLQ86YT9 394 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 ATP8B4Q8TF62 1192 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 NT5C3AQ9H0P0 336 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 EBF2Q9HAK2 575 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 FGFR1OP2Q9NVK5 253 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 ETAA1Q9NY74 926 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
SYNE3-201ENST00000334258 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.84□□□□□ -0.03
SYNE3-201ENST00000334258 PTENP60484 403 aa14.83□□□□□ -0.03
SYNE3-201ENST00000334258 PICALMQ13492 652 aa14.83□□□□□ -0.03
SYNE3-201ENST00000334258 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.03
SYNE3-201ENST00000334258 ANKRD42Q8N9B4 389 aa14.83□□□□□ -0.03
SYNE3-201ENST00000334258 ARMC2Q8NEN0 867 aa14.83□□□□□ -0.03
SYNE3-201ENST00000334258 HES6Q96HZ4 224 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms