RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SNX9Q9Y5X1 595 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 CACNA1FO60840 1977 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SMG6Q86US8 1419 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 AP1S1P61966 158 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 IL9RQ01113 521 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPARCL1Q14515 664 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 EXOC6Q8TAG9 804 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 DNAJC9Q8WXX5 260 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 PPP2R3CQ969Q6 453 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 OSBPL11Q9BXB4 747 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 HEATR1Q9H583 2144 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 NCAM2O15394 837 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 S100A2P29034 98 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAGEA10P43363 369 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 KLHL24Q6TFL4 600 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SYT10Q6XYQ8 523 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ULK2Q8IYT8 1036 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 APOL5Q9BWW9 433 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 STARD3NLO95772 234 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 HMGCRP04035 888 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 FAM200BP0CF97 657 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.382e-6■■■□□ 19
CDC42BPA-201ENST00000334218 RAB2AP61019 212 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ANKRD13CQ8N6S4 541 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC10A4Q96EP9 437 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 IARS2Q9NSE4 1012 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 CPSF3Q9UKF6 684 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ASAP1Q9ULH1 1129 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC12A7Q9Y666 1083 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM110-MUSTN1A8MSY1 372 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 AMPD3Q01432 767 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 SMAD1Q15797 465 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 FAM45BPQ6NSW5 357 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMC6Q7Z403 805 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 NECAB2Q7Z6G3 386 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM110Q86TL2 294 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 DNAAF5Q86Y56 855 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 C3orf20Q8ND61 904 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFT122Q9HBG6 1241 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 RAPGEF6Q8TEU7 1601 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYH1P12882 1939 aa6.46□□□□□ -1.38
CDC42BPA-201ENST00000334218 C2orf71A6NGG8 1288 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NOL4O94818 638 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAPK4P31152 587 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARL3P36405 182 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF76P36508 570 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC9A3P48764 834 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 IDI1Q13907 227 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 BNC2Q6ZN30 1099 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 RASSF6Q6ZTQ3 369 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 LHFPL3Q86UP9 236 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ERICH1Q86X53 443 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 LRRC8CQ8TDW0 803 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 WNK4Q96J92 1243 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NACA2Q9H009 215 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CD79BP40259 229 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ASIC1P78348 528 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PYDC1Q8WXC3 89 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NAPGQ99747 312 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ACAD9Q9H845 621 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CEP170Q5SW79 1584 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TK2O00142 265 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TNFRSF21O75509 655 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SURF6O75683 361 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NTRK1P04629 796 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PHKA1P46020 1223 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 STARP49675 285 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MARSP56192 900 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 GIT2Q14161 759 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MICU2Q8IYU8 434 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC22A8Q8TCC7 542 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SH3TC2Q8TF17 1288 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 DPF1Q92782 380 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 GRAMD1AQ96CP6 724 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRMT1Q9NXH9 659 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PFDN2Q9UHV9 154 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 GGA2Q9UJY4 613 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SOX13Q9UN79 622 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TBC1D2BQ9UPU7 963 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPIDRQ14159 915 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATL3Q6DD88 541 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 DIS3L2Q8IYB7 885 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TSR2Q969E8 191 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAGED4Q96JG8 741 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TCP11L1Q9NUJ3 509 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZMYM3Q14202 1370 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CPA1P15085 419 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NFIAQ12857 509 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF772Q68DY9 489 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 TEKT3Q9BXF9 490 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 CNNM2Q9H8M5 875 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 REV1Q9UBZ9 1251 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 NARSO43776 548 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 PHACTR2O75167 634 aa6.45□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATP6V1G1O75348 118 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms