RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 C2orf54Q08AI8 447 aa19■□□□□ 0.63
DDX28-201ENST00000332395 PLS1Q14651 629 aa19■□□□□ 0.63
DDX28-201ENST00000332395 SMC1AQ14683 1233 aaKnown RBP19■□□□□ 0.63
DDX28-201ENST00000332395 GJB7Q6PEY0 223 aa19■□□□□ 0.63
DDX28-201ENST00000332395 HDXQ7Z353 690 aa19■□□□□ 0.63
DDX28-201ENST00000332395 SLC9A9Q8IVB4 645 aa19■□□□□ 0.63
DDX28-201ENST00000332395 PSMB7Q99436 277 aa19■□□□□ 0.63
DDX28-201ENST00000332395 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
DDX28-201ENST00000332395 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
DDX28-201ENST00000332395 RIPK3Q9Y572 518 aa19■□□□□ 0.63
DDX28-201ENST00000332395 YWHABP31946 246 aaKnown RBP18.99■□□□□ 0.63
DDX28-201ENST00000332395 CXCR5P32302 372 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 PPP2R5AQ15172 486 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 C10orf76Q5T2E6 689 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 ARHGEF16Q5VV41 709 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 ZNF280CQ8ND82 737 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 WRNIP1Q96S55 665 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 SUGCTQ9HAC7 445 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 RNF146Q9NTX7 359 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 TSKSQ9UJT2 592 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 ATP9AO75110 1047 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 MAPTP10636 758 aaKnown RBP18.99■□□□□ 0.63
DDX28-201ENST00000332395 PTPRAP18433 802 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 MCM3P25205 808 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 ITIH3Q06033 890 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 UGCGQ16739 394 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 PICK1Q9NRD5 415 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
DDX28-201ENST00000332395 TESPA1A2RU30 521 aaPredicted RBP18.98■□□□□ 0.63
DDX28-201ENST00000332395 EXOC3O60645 756 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 PALMO75781 387 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 PLS3P13797 630 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 ALCAMQ13740 583 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 CBWD6Q4V339 395 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 CBWD3Q5JTY5 395 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 CBWD5Q5RIA9 395 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 CCDC43Q96MW1 224 aaKnown RBP18.98■□□□□ 0.63
DDX28-201ENST00000332395 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 ANXA13P27216 316 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 BFSP1Q12934 665 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 BAATQ14032 418 aaPredicted RBP18.98■□□□□ 0.63
DDX28-201ENST00000332395 MYBPC2Q14324 1141 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 ANGEL2Q5VTE6 544 aaKnown RBP18.98■□□□□ 0.63
DDX28-201ENST00000332395 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 C4orf19Q8IY42 314 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 SH2D3AQ9BRG2 576 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 TMEM206Q9H813 350 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 NAGPAQ9UK23 515 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 FZD1Q9UP38 647 aa18.98■□□□□ 0.63
DDX28-201ENST00000332395 ZNF541Q9H0D2 1346 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 COL11A1P12107 1806 aaPredicted RBP18.97■□□□□ 0.63
DDX28-201ENST00000332395 TMEM150BA6NC51 233 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 BTNL10A8MVZ5 291 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 WDR64B1ANS9 1081 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 CCNE2O96020 404 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 OAS2P29728 719 aaKnown RBP18.97■□□□□ 0.63
DDX28-201ENST00000332395 JAK3P52333 1124 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 SLC20A2Q08357 652 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 CCDC181Q5TID7 509 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 SPATA4Q8NEY3 305 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 REPS2Q8NFH8 660 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 RLFQ13129 1914 aa18.97■□□□□ 0.63
DDX28-201ENST00000332395 BACH1O14867 736 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 SFNP31947 248 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 HMGCS2P54868 508 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 HNRNPH2P55795 449 aaKnown RBP18.96■□□□□ 0.63
DDX28-201ENST00000332395 PSMC5P62195 406 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 KRT76Q01546 638 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 SNRNP48Q6IEG0 339 aaKnown RBP18.96■□□□□ 0.63
DDX28-201ENST00000332395 ALKBH5Q6P6C2 394 aaKnown RBP18.96■□□□□ 0.63
DDX28-201ENST00000332395 APOBEC3FQ8IUX4 373 aaKnown RBP18.96■□□□□ 0.63
DDX28-201ENST00000332395 MMGT1Q8N4V1 131 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 PHIPQ8WWQ0 1821 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 UTRNP46939 3433 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 FTCDO95954 541 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 FERP16591 822 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 STAT1P42224 750 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 MYL7Q01449 175 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 CASP8Q14790 479 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 VPS36Q86VN1 386 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 MSL3Q8N5Y2 521 aaKnown RBP18.96■□□□□ 0.63
DDX28-201ENST00000332395 RDH13Q8NBN7 331 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 C12orf42Q96LP6 360 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 ACCSQ96QU6 501 aa18.96■□□□□ 0.63
DDX28-201ENST00000332395 TISP43B9A030 160 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 F8VZ95 297 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 GFPT2O94808 682 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 CCND2P30279 289 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 PAFAH1B1P43034 410 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 CCDC70Q6NSX1 233 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 TRMT1LQ7Z2T5 733 aaKnown RBP18.95■□□□□ 0.62
DDX28-201ENST00000332395 VSIG10LQ86VR7 867 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 TIPINQ9BVW5 301 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 STK33Q9BYT3 514 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 SMARCAL1Q9NZC9 954 aa18.95■□□□□ 0.62
DDX28-201ENST00000332395 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms