RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	DAGLB	Q8NCG7	672 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	RNF34	Q969K3	372 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	OSBPL9	Q96SU4	736 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	C11orf70	Q9BRQ4	267 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	PI4K2A	Q9BTU6	479 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	IQCG	Q9H095	443 aa	Known RBP	12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	KIF1A	Q12756	1690 aa		12.79	□□□□□ -0.36
DDR1-223	ENST00000324771	EIF3CL	B5ME19	914 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	CLDN3	O15551	220 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	CYP26A1	O43174	497 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	RNF40	O75150	1001 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	INTS8	Q75QN2	995 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	RPUSD2	Q8IZ73	545 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	ZNF710	Q8N1W2	664 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	RIN2	Q8WYP3	895 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	EIF3C	Q99613	913 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	ADPGK	Q9BRR6	497 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	INTS13	Q9NVM9	706 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	XRN1	Q8IZH2	1706 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771		E7EVH7	732 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	MDM2	Q00987	491 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	KRT76	Q01546	638 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	GABPB1	Q06547	395 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	NFX1	Q12986	1120 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	CYP4F22	Q6NT55	531 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	FAM163A	Q96GL9	167 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	DNAI2	Q9GZS0	605 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	INTS2	Q9H0H0	1204 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	SNX24	Q9Y343	169 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	EML1	O00423	815 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	UNC45A	Q9H3U1	944 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	VPS37B	Q9H9H4	285 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	BLOC1S4	Q9NUP1	217 aa		12.78	□□□□□ -0.36
DDR1-223	ENST00000324771	GAS8	O95995	478 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	DHX9	Q08211	1270 aa	Known RBP	12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	PPFIA1	Q13136	1202 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	PPP2R5A	Q15172	486 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	FAM149B1	Q96BN6	582 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	TEX13B	Q9BXU2	312 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	DAAM1	Q9Y4D1	1078 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	CACNA1F	O60840	1977 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	KLRC1	P26715	233 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	BCAS4	Q8TDM0	211 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	MXRA8	Q9BRK3	442 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	LRRC1	Q9BTT6	524 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	IKZF4	Q9H2S9	585 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	PLCB1	Q9NQ66	1216 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	ZNF302	Q9NR11	478 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771	PARP2	Q9UGN5	583 aa		12.77	□□□□□ -0.36
DDR1-223	ENST00000324771		A0A087X0T9	212 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	WDR46	O15213	610 aa	Known RBP	12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	ATMIN	O43313	823 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	GGPS1	O95749	300 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	FAM228B	P0C875	321 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	KRT15	P19012	456 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	CDKAL1	Q5VV42	579 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	DENND2C	Q68D51	928 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	MICALCL	Q6ZW33	695 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	LRRC71	Q8N4P6	559 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	ATP6V0A4	Q9HBG4	840 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	JPH1	Q9HDC5	661 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	SLC9A2	Q9UBY0	812 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	ANAPC7	Q9UJX3	599 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	PDXK	O00764	312 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	DAPK3	O43293	454 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	IVL	P07476	585 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	JAK3	P52333	1124 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	E2F4	Q16254	413 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	SCFD1	Q8WVM8	642 aa		12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	CNOT8	Q9UFF9	292 aa	Known RBP	12.77	□□□□□ -0.37
DDR1-223	ENST00000324771	DDN	O94850	711 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	HDLBP	Q00341	1268 aa	Known RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	ORC2	Q13416	577 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CDO1	Q16878	200 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CASC4	Q6P4E1	433 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	ARMC9	Q7Z3E5	817 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CTAGE3P	Q8IX95	158 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	COG1	Q8WTW3	980 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	DUSP9	Q99956	384 aa	Known RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	RAB17	Q9H0T7	212 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	TMX2	Q9Y320	296 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	PIK3R2	O00459	728 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	EVI5	O60447	810 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CSDE1	O75534	798 aa	Known RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CSPG5	O95196	566 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	SMARCA1	P28370	1054 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	MAP3K9	P80192	1104 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	RNF149	Q8NC42	400 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	PACSIN1	Q9BY11	444 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	RASSF4	Q9H2L5	321 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	TBK1	Q9UHD2	729 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	RGS16	O15492	202 aa	Predicted RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	COPB2	P35606	906 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	TMEM62	Q0P6H9	643 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CRY2	Q49AN0	593 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	POP1	Q99575	1024 aa	Known RBP	12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	MTR	Q99707	1265 aa		12.76	□□□□□ -0.37
DDR1-223	ENST00000324771	CBWD1	Q9BRT8	395 aa		12.76	□□□□□ -0.37

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