RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 DGKDQ16760 1214 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 UTP14CQ5TAP6 766 aaKnown RBP19.92■□□□□ 0.78
SYNE4-201ENST00000324444 SLC39A5Q6ZMH5 540 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 ATP8B4Q8TF62 1192 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 SLC7A3Q8WY07 619 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 TSG101Q99816 390 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 ATP6V0A4Q9HBG4 840 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 SLC39A2Q9NP94 309 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 GDAQ9Y2T3 454 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 UBE4BO95155 1302 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 SYNRGQ9UMZ2 1314 aa19.92■□□□□ 0.78
SYNE4-201ENST00000324444 H0YCG3 227 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 ZBTB39O15060 712 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 HBP1O60381 514 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 USO1O60763 962 aaKnown RBP19.91■□□□□ 0.78
SYNE4-201ENST00000324444 STBD1O95210 358 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 CCNE1P24864 410 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 CPT1AP50416 773 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 KLHL10Q6JEL2 608 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 ANKRD20A12PQ8NF67 263 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 NELFBQ8WX92 580 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 MRPL44Q9H9J2 332 aaKnown RBP19.91■□□□□ 0.78
SYNE4-201ENST00000324444 PHF24Q9UPV7 400 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 PCDHB13Q9Y5F0 798 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 ARID2Q68CP9 1835 aa19.91■□□□□ 0.78
SYNE4-201ENST00000324444 NPHP3-ACAD11A0A0J9YXS1 232 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
SYNE4-201ENST00000324444 KPNA6O60684 536 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 HIP1RO75146 1068 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 ADAMTS4O75173 837 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 DUSP11O75319 330 aaKnown RBP19.9■□□□□ 0.78
SYNE4-201ENST00000324444 SMTNP53814 917 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 POLGP54098 1239 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-201ENST00000324444 LRRC63Q05C16 580 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 RAD51AP2Q09MP3 1159 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 TLK2Q86UE8 772 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 FAM178BQ8IXR5 827 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 AFG1LQ8WV93 481 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 P2RX5Q93086 422 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 PCYT2Q99447 389 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 SPC25Q9HBM1 224 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 CTNND2Q9UQB3 1225 aa19.9■□□□□ 0.78
SYNE4-201ENST00000324444 PLS3P13797 630 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 CD44P16070 742 aaKnown RBP19.89■□□□□ 0.77
SYNE4-201ENST00000324444 NKX3-2P78367 333 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 SPAG1Q07617 926 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 TRIM60Q495X7 471 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 ZNF484Q5JVG2 852 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 ODR4Q5SWX8 454 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 PLA2G4FQ68DD2 849 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 SARM1Q6SZW1 724 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 SFR1Q86XK3 245 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 FAM114A1Q8IWE2 563 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 SMYD4Q8IYR2 804 aaPredicted RBP19.89■□□□□ 0.77
SYNE4-201ENST00000324444 KIAA0895Q8NCT3 520 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 TCP11Q8WWU5 503 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 IFT74Q96LB3 600 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 UBE2OQ9C0C9 1292 aaKnown RBP19.89■□□□□ 0.77
SYNE4-201ENST00000324444 PRKAG2Q9UGJ0 569 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 NFE2L3Q9Y4A8 694 aa19.89■□□□□ 0.77
SYNE4-201ENST00000324444 A6NJR5 290 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 DYNC1LI2O43237 492 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-201ENST00000324444 LGALS2P05162 132 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 TPM3P06753 285 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 MMP3P08254 477 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 NPEPPSP55786 919 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 NCAPHQ15003 741 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 SNX17Q15036 470 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 PPP2R5AQ15172 486 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 MTERF2Q49AM1 385 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 CENPPQ6IPU0 288 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 TSEN34Q9BSV6 310 aaKnown RBP19.88■□□□□ 0.77
SYNE4-201ENST00000324444 UPF3AQ9H1J1 476 aaKnown RBP19.88■□□□□ 0.77
SYNE4-201ENST00000324444 DHX33Q9H6R0 707 aaKnown RBP19.88■□□□□ 0.77
SYNE4-201ENST00000324444 PCDHA2Q9Y5H9 948 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 COL1A2P08123 1366 aa19.88■□□□□ 0.77
SYNE4-201ENST00000324444 A0A1W2PQ45 241 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 A0A1W2PQY0 241 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 MYADML2A6NDP7 307 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 CBFA2T2O43439 604 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 ATP4AP20648 1035 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 CDK11BP21127 795 aaKnown RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 CACNB1Q02641 598 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 DMP1Q13316 513 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 PLCB4Q15147 1175 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 TARBP2Q15633 366 aaKnown RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 BMT2Q1RMZ1 405 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 FAM102BQ5T8I3 360 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 SPIRE2Q8WWL2 714 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 HVCN1Q96D96 273 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 CTAGE1Q96RT6 745 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 LBHD1Q9BQE6 289 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 ST6GALNAC4Q9H4F1 302 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 PRDM5Q9NQX1 630 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-201ENST00000324444 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 TRPC6Q9Y210 931 aa19.87■□□□□ 0.77
SYNE4-201ENST00000324444 SOX1O00570 391 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms