RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-201ENST00000321105 MAPK4P31152 587 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 PSMC5P62195 406 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 ANKRD42Q8N9B4 389 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 HAS1Q92839 578 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 MAK16Q9BXY0 300 aaKnown RBP11.9□□□□□ -0.5
TOP3A-201ENST00000321105 ACAD9Q9H845 621 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 PIK3R2O00459 728 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 CLDN3O15551 220 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 AKAP3O75969 853 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 CSPG5O95196 566 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 LMNB1P20700 586 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 ADCY8P40145 1251 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 NT5C2P49902 561 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 SHISA4Q96DD7 197 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 NAP1L3Q99457 506 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-201ENST00000321105 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 LRRC1Q9BTT6 524 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 TEX13BQ9BXU2 312 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 POLR3FQ9H1D9 316 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-201ENST00000321105 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 CAPN6Q9Y6Q1 641 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 IFNAR2P48551 515 aa11.9□□□□□ -0.51
TOP3A-201ENST00000321105 TUBB4BP68371 445 aa11.9□□□□□ -0.51
TOP3A-201ENST00000321105 NFX1Q12986 1120 aaKnown RBP11.9□□□□□ -0.51
TOP3A-201ENST00000321105 ECM1Q16610 540 aa11.9□□□□□ -0.51
TOP3A-201ENST00000321105 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.51
TOP3A-201ENST00000321105 UBE2Q2Q8WVN8 375 aa11.9□□□□□ -0.51
TOP3A-201ENST00000321105 MXRA8Q9BRK3 442 aa11.9□□□□□ -0.51
TOP3A-201ENST00000321105 JPH1Q9HDC5 661 aaPredicted RBP11.9□□□□□ -0.51
TOP3A-201ENST00000321105 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.51
TOP3A-201ENST00000321105 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 PLSCR1O15162 318 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 EPHB6O15197 1021 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 VCAM1P19320 739 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 MICALL1Q8N3F8 863 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 IQCDQ96DY2 449 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 FAM118BQ9BPY3 351 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 INTS2Q9H0H0 1204 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 EIF3CLB5ME19 914 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 EVI5O60447 810 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 RNF40O75150 1001 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 GGPS1O95749 300 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 TBC1D8O95759 1140 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 GIT2Q14161 759 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 NPY5RQ15761 445 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 SLC35G1Q2M3R5 365 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 INTS8Q75QN2 995 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 EIF3CQ99613 913 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 ADAM33Q9BZ11 813 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 SNX24Q9Y343 169 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 PGRMC1O00264 195 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
TOP3A-201ENST00000321105 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 KRT76Q01546 638 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 ZSCAN26Q16670 478 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 CYP4F22Q6NT55 531 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 CDHR1Q96JP9 859 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 BCAS3Q9H6U6 928 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
TOP3A-201ENST00000321105 GNGT1P63211 74 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 SMAP1Q8IYB5 467 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 RPGRIP1Q96KN7 1286 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 ANAPC7Q9UJX3 599 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 PDXKO00764 312 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 MEIS2O14770 477 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 TNNC2P02585 160 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 HDLBPQ00341 1268 aaKnown RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 CDO1Q16878 200 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 POTEAQ6S8J7 498 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 PLCD4Q9BRC7 762 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 MMTAG2Q9BU76 263 aaKnown RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 AMACRQ9UHK6 382 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 MAGED2Q9UNF1 606 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 N4BP1O75113 896 aaKnown RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 KIF4AO95239 1232 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 MUM1L1Q5H9M0 696 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-201ENST00000321105 SPATA4Q8NEY3 305 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 TNFRSF25Q93038 417 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 FAM149B1Q96BN6 582 aa11.88□□□□□ -0.51
TOP3A-201ENST00000321105 KLHL11Q9NVR0 708 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms