RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 MCUQ8NE86 351 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 GABPB2Q8TAK5 448 aaPredicted RBP9.72□□□□□ -0.85
CTC1-201ENST00000315684 ZNF512Q96ME7 567 aaPredicted RBP9.72□□□□□ -0.85
CTC1-201ENST00000315684 DEFB118Q96PH6 123 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 KRT12Q99456 494 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 ERAP1Q9NZ08 941 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 ZNF541Q9H0D2 1346 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 NNMTP40261 264 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 MYO1FO00160 1098 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 PRPSAP2O60256 369 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 PGK1P00558 417 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 WEE1P30291 646 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 SURF1Q15526 300 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 MB21D2Q8IYB1 491 aaPredicted RBP9.72□□□□□ -0.85
CTC1-201ENST00000315684 CD99L2Q8TCZ2 262 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 NYAP2Q9P242 653 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 NR2E3Q9Y5X4 410 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 BCL9O00512 1426 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 LDHAP00338 332 aaKnown RBP9.72□□□□□ -0.85
CTC1-201ENST00000315684 KRT1P04264 644 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 CLUL1Q15846 466 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 ERICH1Q86X53 443 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 GDAP1L1Q96MZ0 367 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 SPATC1LQ9H0A9 340 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
CTC1-201ENST00000315684 AGAP1Q9UPQ3 857 aa9.72□□□□□ -0.85
CTC1-201ENST00000315684 IRF6O14896 467 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 ORC4O43929 436 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 COPB1P53618 953 aaKnown RBP9.71□□□□□ -0.85
CTC1-201ENST00000315684 JMJD4Q9H9V9 463 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 CERS4Q9HA82 394 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 SETD4Q9NVD3 440 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 AGO2Q9UKV8 859 aaKnown RBP9.71□□□□□ -0.85
CTC1-201ENST00000315684 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 LRG1P02750 347 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 TKFCQ3LXA3 575 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 SYCE1Q8N0S2 351 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.85
CTC1-201ENST00000315684 RAD54LQ92698 747 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 CAPNS2Q96L46 248 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 SENP7Q9BQF6 1050 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 RNF19AQ9NV58 838 aa9.71□□□□□ -0.85
CTC1-201ENST00000315684 NFIBO00712 420 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 MGARPQ8TDB4 240 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 TMEM169Q96HH4 297 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 NAPGQ99747 312 aaPredicted RBP9.71□□□□□ -0.86
CTC1-201ENST00000315684 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 CLCN3P51790 818 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 SLC12A1Q13621 1099 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 SLC10A5Q5PT55 438 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 ZNF658Q5TYW1 1059 aaPredicted RBP9.71□□□□□ -0.86
CTC1-201ENST00000315684 DPH5Q9H2P9 285 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 ABI2Q9NYB9 513 aaPredicted RBP9.71□□□□□ -0.86
CTC1-201ENST00000315684 HPCAL4Q9UM19 191 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 PPP6R2O75170 966 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 NOLC1Q14978 699 aaKnown RBP eCLIP9.71□□□□□ -0.86
CTC1-201ENST00000315684 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
CTC1-201ENST00000315684 FAM20AQ96MK3 541 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 SAMD15Q9P1V8 674 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 PAXBP1Q9Y5B6 917 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 RICTORQ6R327 1708 aa9.71□□□□□ -0.86
CTC1-201ENST00000315684 TRIP13Q15645 432 aaPredicted RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 RAPH1Q70E73 1250 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 ADGRA1Q86SQ6 560 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 TBKBP1A7MCY6 615 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 RGS7P49802 495 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 COASYQ13057 564 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 ATRIPQ8WXE1 791 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 MMTAG2Q9BU76 263 aaKnown RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 DYRK4Q9NR20 520 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 RGS12O14924 1447 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 AOC2O75106 756 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 PSMA2P25787 234 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 GBP1P32455 592 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 NPEPPSP55786 919 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 BPIFB4P59827 614 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 EMC2Q15006 297 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 ARL13BQ3SXY8 428 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 TMC7Q7Z402 723 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 SNX19Q92543 992 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 RTFDC1Q9BY42 306 aaPredicted RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 RABEP2Q9H5N1 569 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 OLA1Q9NTK5 396 aaKnown RBP9.7□□□□□ -0.86
CTC1-201ENST00000315684 ZNF75DP51815 510 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 SPECC1LQ69YQ0 1117 aa9.7□□□□□ -0.86
CTC1-201ENST00000315684 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms