RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MIS18BP1Q6P0N0 1132 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 PDCD7Q8N8D1 485 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
COL6A5-202ENST00000312481 MTO1Q9Y2Z2 717 aaKnown RBP9.43□□□□□ -0.9
COL6A5-202ENST00000312481 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 KLHL2O95198 593 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ZRANB2O95218 330 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 RPL22P35268 128 aaKnown RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ITPRIPL1Q6GPH6 555 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 TOGARAM2Q6ZUX3 1019 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF212Q9UDV6 495 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 UFL1O94874 794 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CDH2P19022 906 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 COPS2P61201 443 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ENPEPQ07075 957 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 KDM7AQ6ZMT4 941 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CENPTQ96BT3 561 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 VPS33BQ9H267 617 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 GOLPH3LQ9H4A5 285 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 WHRNQ9P202 907 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ATRNO75882 1429 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 USP17L21D6R901 530 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PIK3R2O00459 728 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 SRGNP10124 158 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PLCG1P19174 1290 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CCNA1P78396 465 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ACAD11Q709F0 780 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 SPATA4Q8NEY3 305 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 DNAJB2P25686 324 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 AARSP49588 968 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 NACA2Q9H009 215 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CCDC88CQ9P219 2028 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 POTEB3A0JP26 581 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 LRRIQ3A6PVS8 624 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 DNAJC24Q6P3W2 148 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 POTEBQ6S5H4 581 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 NLRP10Q86W26 655 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 N4BP2L2Q92802 583 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CCDC127Q96BQ5 260 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PLAGL2Q9UPG8 496 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF148Q9UQR1 794 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 TRIP11Q15643 1979 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 FAM237AA0A1B0GTK4 181 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 MT-ND3P03897 115 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ABCE1P61221 599 aaKnown RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 POLE3Q9NRF9 147 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ADGRA3Q8IWK6 1321 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 PDE4DIPQ5VU43 2346 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 GZMAP12544 262 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 CERKLQ49MI3 558 aaPredicted RBP9.42□□□□□ -0.9
COL6A5-202ENST00000312481 RHOT1Q8IXI2 618 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ANKFY1Q9P2R3 1169 aa9.42□□□□□ -0.9
COL6A5-202ENST00000312481 ZBTB5O15062 677 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 EIF4A3P38919 411 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 AP1B1Q10567 949 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CCDC126Q96EE4 140 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TKTP29401 623 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 SKIV2L2P42285 1042 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 KBTBD12Q3ZCT8 623 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 CCDC78A2IDD5 438 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 TMEM191BP0C7N4 346 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 EFNA5P52803 228 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 PIGHQ14442 188 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 E2F5Q15329 346 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 KNOP1Q1ED39 458 aaKnown RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 COA1Q9GZY4 146 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 PIK3CAP42336 1068 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ICA1Q05084 483 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 RAB21Q9UL25 225 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 NFU1Q9UMS0 254 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 IFNA8P32881 189 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ARL4AP40617 200 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 LIG3P49916 1009 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 DPP8Q6V1X1 898 aaPredicted RBP9.41□□□□□ -0.9
COL6A5-202ENST00000312481 DESI2Q9BSY9 194 aa9.41□□□□□ -0.9
COL6A5-202ENST00000312481 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms