RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TCEAL9Q9UHQ7 104 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 ETS2P15036 469 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 ERFP50548 548 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 NAPAP54920 295 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 GRAPQ13588 217 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TNIP1Q15025 636 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CXorf38Q8TB03 319 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 GRAPLQ8TC17 118 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 KIFAP3Q92845 792 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 DUSP9Q99956 384 aaKnown RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 MTA3Q9BTC8 594 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 SPATA7Q9P0W8 599 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 HYOU1Q9Y4L1 999 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 BUB1O43683 1085 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 XRCC4Q13426 336 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CABP7Q86V35 215 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CLEC10AQ8IUN9 316 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 GLIS3Q8NEA6 775 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 LARSQ9P2J5 1176 aaKnown RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 DAAM1Q9Y4D1 1078 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 USP46P62068 366 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 CRELD2Q6UXH1 353 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 EXOC1Q9NV70 894 aa11.29□□□□□ -0.6
MSRB3-201ENST00000308259 AHDC1Q5TGY3 1603 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-201ENST00000308259 NCK2O43639 380 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 MGRN1O60291 552 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 CENPKQ9BS16 269 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 MMRN2Q9H8L6 949 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 KLHL14Q9P2G3 628 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 ATXN10Q9UBB4 475 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 FRMPD2Q68DX3 1309 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-201ENST00000308259 ORC4O43929 436 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 CALML3P27482 149 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 NFRKBQ6P4R8 1299 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 LUC7LQ9NQ29 371 aaKnown RBP11.28□□□□□ -0.6
MSRB3-201ENST00000308259 A8MUI8 341 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-201ENST00000308259 MOCS3O95396 460 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 TMEM62Q0P6H9 643 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 MTHFD1LQ6UB35 978 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
MSRB3-201ENST00000308259 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF263O14978 683 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 UBOX5O94941 541 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 ALOX15P16050 662 aaPredicted RBP11.27□□□□□ -0.6
MSRB3-201ENST00000308259 TCP1P17987 556 aaKnown RBP11.27□□□□□ -0.6
MSRB3-201ENST00000308259 TRAPPC10P48553 1259 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 CCDC15Q0P6D6 951 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 AMIGO3Q86WK7 504 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 LRRC8CQ8TDW0 803 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 ATXN2Q99700 1313 aaKnown RBP11.27□□□□□ -0.6
MSRB3-201ENST00000308259 KRT38O76015 456 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 ZBTB7AO95365 584 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 BAG2O95816 211 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 FGRP09769 529 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.6
MSRB3-201ENST00000308259 MLH1P40692 756 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 NFIXQ14938 502 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 CCDC25Q86WR0 208 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 NDEL1Q9GZM8 345 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 MLXIPLQ9NP71 852 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 ARPP21Q9UBL0 812 aaPredicted RBP11.27□□□□□ -0.6
MSRB3-201ENST00000308259 CAPN6Q9Y6Q1 641 aa11.27□□□□□ -0.6
MSRB3-201ENST00000308259 COL14A1Q05707 1796 aaKnown RBP11.27□□□□□ -0.61
MSRB3-201ENST00000308259 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ABL2P42684 1182 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 RASSF7Q02833 373 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 R3HDM1Q15032 1099 aaKnown RBP11.27□□□□□ -0.61
MSRB3-201ENST00000308259 HS2ST1Q7LGA3 356 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 TSPAN18Q96SJ8 248 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms